| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0264 |
|---|
| Symbol | |
|---|
| ID | 7383848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 282190 |
|---|
| End bp | 283287 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643653577 |
|---|
| Product | VanZ family protein |
|---|
| Protein accession | YP_002551748 |
|---|
| Protein GI | 222109484 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5652] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.017314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGA CGTCCGCCTG GCCTCTGGCG CTCATCTACG CGGCGCTGAT CGTCTTCGCC
AGCCTGTTCC CGTTCGACGG GTGGCGCGAG CAGGGAATCT CGCCCTGGGT GTTCTTCTCG
GCGCGCATCC CGCCGCCGTA CTGGACCTGG TTCGACGTCA ACATGAACAT CGCGGGCTAT
GCCCCGCTGG GGTTCCTGCT GGCCCTGGCG GGCCTGCGTT CTGGCTGGCC GCGCGCGGCC
GTGCCGTTGG CGGCACTGGC GGGTGCGCTG CTGTCGCTGA GCATGGAATA CCTGCAGATC
TTCCTGCCGC GGCGGGTGCC GTCCAACATG GACTTCGCGC TCAACGCGAC CGGTGCGCTG
CTGGGAGCGT TGGCGGCCGC GCTGCTGGAG CGCTTCGGGG CCATTGCGCA CTGGAGCCGC
TTTCGCGAGC GCTGGTTCGT TCCGCATGCG CGCGGCGCGC TGGTGCTACT GGCGCTGTGG
CCCTGGGCAC TGCTGTTCCC GGCGGCGCTG CCCTTTGGCC TGGGGCAGAT GTGGGAGCGG
CTGGAGGCCG CGCTCATCGA CGCGCTGCAG GACACGCCGT TTCTGCAGTG GCTGCCCGTG
CGCGAGGCGC CGCTGGAGCC ACTGTCGCCG GGCGCGGAGC TCATGGCCGT CGCGCTGGGG
CTGCTGATCC CCTGCCTGCT GGGCTACTGC GTCATGCGCC ATGCGGGGCG CCGCATGGCC
TTCGCACTGG CGACGGCCGC CGTGGGCGTG GGCGTGACGG CGCTGTCGTC GCTGTTGAGC
TACGGGCCCA CGCACGCCTG GGAGTGGCTC ACGCTGCCGG CCCGCATGGG CGTGCTTGTT
GCCCTGGGGG CGGCCCTGGC GATGGCGGCC GTGCCGCGGC GCGGCTGCGC GGCGTTACTG
CTGCTGGCGC TGATGCTGCA CCTGAACCTG CTCAACCAGG CGCCCACCAG CGCCTACTTC
GCACAGACGC TGCAGGCCTG GGAGCAGGGG CGCTTCATCC GCTTCTACGG CCTGGGGCAG
TGGCTGGGCT GGCTCTGGCC CTATGGGGCA CTCGTCTATG TGGTATTGCG GGTGTCGCGC
CGCGATGGCG ACTCCTAG
|
|---|
| Protein sequence | MHKTSAWPLA LIYAALIVFA SLFPFDGWRE QGISPWVFFS ARIPPPYWTW FDVNMNIAGY
APLGFLLALA GLRSGWPRAA VPLAALAGAL LSLSMEYLQI FLPRRVPSNM DFALNATGAL
LGALAAALLE RFGAIAHWSR FRERWFVPHA RGALVLLALW PWALLFPAAL PFGLGQMWER
LEAALIDALQ DTPFLQWLPV REAPLEPLSP GAELMAVALG LLIPCLLGYC VMRHAGRRMA
FALATAAVGV GVTALSSLLS YGPTHAWEWL TLPARMGVLV ALGAALAMAA VPRRGCAALL
LLALMLHLNL LNQAPTSAYF AQTLQAWEQG RFIRFYGLGQ WLGWLWPYGA LVYVVLRVSR
RDGDS
|
|---|
| |