Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0247 |
Symbol | |
ID | 7383831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 267438 |
End bp | 268112 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643653560 |
Product | protein of unknown function DUF330 |
Protein accession | YP_002551731 |
Protein GI | 222109467 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.661362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATCA AAATGATAGC TGTTGGCGCT CACCAGATAA GCGTTAAAGC CATTTTTGGC TTCACATTTA TGGCGCTGAT GGCGGGCTGC TCCATCCTCC CCGAGCCGCC GGTGCGCGCC GATGTGTACG ACTTCGGCCC CGGTCCCTTG CAGGCGCCGG GCCCCGCGGC CAGCGCGCCG CTGCCGCCGA TCGCGCTGGC CGAGGTGACC GCCACGGGCC TGCCCGAGGG CAGCACCGCG CTGCTGTACC GGCTGGCCTA TACCAACGCC CAGCAACTGC GCCCCTACAC CCAGGCGCGC TGGAGCCTGC CACCCGCCGT GCTGCTGCAC CAGGCGGTGC GCGAGCGCCT GGGCCAGCGC CGCGCGGTGC TCTCAGGCGA CGACGGCATG GCCGTGTTGC TGGAGCGCGG CCGCATGCCC AGCGTGCTGC GCCTGGAACT GGAGGAGTTC AGCCATGTGT TCGGCGCGCC CCAGGCGAGC GCCGGCCTGG TGCGTGTGCG CGCCGTGCTG GCCGACGCGA GCACCGCGGG TGAGACGCTG GTCACGCAGC GGGTGTTCGT GGCGCGGCGC GATGCCGCCA CGCCCGATGC CGCCGGCGGC GCCAAGGCCC TGGCCGATGC GGCGGCCCAG GTGGCCGAGG AGCTGGCCGC ATGGGTGGAG CAGTCCGGCC GCTGA
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Protein sequence | MTIKMIAVGA HQISVKAIFG FTFMALMAGC SILPEPPVRA DVYDFGPGPL QAPGPAASAP LPPIALAEVT ATGLPEGSTA LLYRLAYTNA QQLRPYTQAR WSLPPAVLLH QAVRERLGQR RAVLSGDDGM AVLLERGRMP SVLRLELEEF SHVFGAPQAS AGLVRVRAVL ADASTAGETL VTQRVFVARR DAATPDAAGG AKALADAAAQ VAEELAAWVE QSGR
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