| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3298 |
|---|
| Symbol | |
|---|
| ID | 8430292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 3492468 |
|---|
| End bp | 3497693 |
|---|
| Gene Length | 5226 bp |
|---|
| Protein Length | 1741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645035534 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003192653 |
|---|
| Protein GI | 258516431 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAATC CTAACGGGGT ACAGGAGTAT TATCAGGCTA TTCGGGATAG GCTGAAGAAC
TACATCAAGT CCGACTACTT GGCAAACAGC GAAACTCTAT TGCTTTATGT CGACGATCTT
CTCGGCGAGT TGTGTTCTGA GTACACGAAC ATCGCCCGCG AGCCGTATAT TGAAACCGCT
GCTTCTTACA AGAAAATACA GGACGGAATT CAAAACTCTT CCCGAATCAA GCAAGGAGTA
AAAGAGTCGT TGTTCAAATT GGTAGCCAAA GGCCTCGGCA TTTTCTCCGA CCCGTTTGAG
CATCAGGTAA AGGCACTGGA ATATTTCCTT GCTGGACGAG ACCTGTTTGT TTCGACCGGT
ACTGGCTCTG GTAAGACTGA GTGCTTCCTT TGGCCGATTA TTGCAAAGTG TTTCGATGAA
GCAAAGAATC ATCCTGCGAT CTTTAAGAAC GAAGCGGTTC GCACACTTAT CATTTACCCA
ATGAATTCAC TGGTTTCAGA CCAACTGGCT CGTTTCAGAA AAATTATCGG TAGCCCGGAC
TTCAAATATA TATTTACGCG CGATACCCAC GCATCACGGA TACCTCATTT CGGTATGTAC
ACAGGCAGAA CTCCGTACTC TGGTGATGCA AAAAAAGCAA GTAGCCAAGA ACTGGCGATA
ACTTTCCGAG AGAACTACCT AATTGACGAA ACTGCCGATG CCTACACTCA AAGAAGGCAA
ACGAATAATA TCAAAGGACT TAAAAGCATC AGCAAATATC CTGCGCGGTT TGGGGAAGAC
GGACTTCGTG TCTTTATTGA GAATCTTGAA AAGAACATCC ACAGACCGTC ACCATATGAT
GCCGAGTTCA TTACGCGCTT TGAGATGCAG AATTGTCCGC CTGACATTCT TATTACCAAC
TACTCAATGT TAGAGTATAT GCTTATGCGT CAGCGTGAAG CTAACATTTG GGATAAAACA
AAGGAGTGGC TTGAGACCTC GGATGAGAAC AAACTGCTTA TTGTTCTTGA TGAGGCGCAT
ATGTACCGTG GCTCTGCCGG AGGGGAAATT GCGCTCCTGC TAGAAAGGCT GTTCTACCGT
CTAGGAATTT CCTCAGAAAA GGTTCAGTTC ATCCTGACAA CTGCGAGTAT GCCCCAGAAC
GAGCAGACTG CAATTAACGG TTTTTATACC GGACTAACTG GAAAAGTTGC TTCTTCTTGT
GAGTTCCTCT TTGGCTCAAA AGAGGAGATT CCTGACGAAC AGGAAATAAG AACGGATATA
GAAGCATTAG CCTCGATAGA TTCCGACCAA GTCCAAGGAG AAGCAATCAC TAAGCGGATT
GCCGCTTTTG CATCTTCCGT ATTTAAGACG ACCTTGCCGT CTGACATTAG CCAGGATAGC
GCACAAGAGT GGCTATACGA CAATCTTCCG AAGTATGAGG CTTTCGTAAA GCTGAATAGA
CTCTGCCGTG ATGGTGCGAA ATCATATAGC GAAATAAAAG AAGTTATCTT TGGGAATGTA
GCTACTTCCG AAAAGGCGCT TGATGCCTTG TTAGTATTGG TTTCACTGGC CGCGAAAGGC
GGTAATATTC TGTTCCCTGT CAGGCTTCAT ATGTTTCTTC GTGGCTTGCA GGGGCTTTAT
ACCTGCTCGA ACCCTAAATG CACCCGTGCG AAACAATCAG AAAGTGAAAA ATTGCCGCTT
GGGAAAATCA TCTCTATTCC GAAGGATAAG TGCGAGTGCG GAGGCAAGAT ATACGAACTC
TTCAATCACA TAAAATGTGG AGCGTTATAT ATTCGAGCAT TTGTTCAAAA AAACGAGGGT
CAGCCATACT GGTACGTCTT CCCGAAAAAG GGTTTGGATG GGGATGTTAA TTCTTTGCAA
GAAACATTGC TTTACGTCGT CCCAAAACAA TATCAGTGCG GGAAGAATGA TAAGATTGGC
TCCCTTGACC CATTCACAGG TAAACTGTAT CTGACCCTGC AGGATGAGGA AACTTTGCTT
GATGTTGTCT ACTACAATAA AAGTGAAAAA GGTAAAAAGA CAGATGCGAA AGGAATGCCT
TTTAACTTTG GTGTATGCCC AAAATGTAAA AAGCCGATGC CGTTAAAAAA ACCCGTCGAC
TTGTCAACCA AAGGGAATAT ACCGTTTTAC AACCTGACTA AGTCTCAATT CGAGCTTCAA
CCACCAAAGT CAGGCCTTAT TAACCAAGGT AAAAAGGTAT TACTGTTCTC CGATTCGCGC
CAAAATGCGG CAAAACTCGC ATTAGACCTT TCAAAATCTT CTGACGCAGA TGCGTTTCGG
CAGGCTGTAA TGCTCGCTTC ACTATTGTTA GAGGTGGATG GTAAAGAACA CTCCTTGGCT
GATTTGTACC CTGCGTTTCT GGATGCGTGC AATCAGAATA ACCTTACTTT CTTTAGCGGA
ACAAGCAAAG ACAAATTCGA TGGTGATAAG CGAAAATTTG CCAAATCTAA AGCAAACGCA
GAAAAACGTG GACGAACAAT TAACTATTCC TCCTTGCTTG GTGATTACGG TGCATTACCA
GACAATTACT ATGAACAACT TTTAACTTTC TTTACTGAAA GTCCTCGTTC ATTCAAGGAT
ATTGGAATAG GTTTTTTAGC ACCATTATCT ACAGTTCTGG ATCTTTGTAT GGAATACTTA
GAAGACGATG ATATCAGTAT CGATAAAGCT AAGCTTTACC AATTGCTGGT TCTGATGTTC
TGGGAAGTGA TGGATGACAG CGCAGCCTTG GGAGAAACCA TTCAAGACGA TGTGCGAAAA
GGGCTACCCG GGCGGAGCAA GAGCTCTAAT TTTGGACTGA GCTTCGACTT TTTAACAGCA
TTGGATAAAG GACTGCTTCA GCGAATTCAG GAAGTATTGT GCCACGATGC CATAACAACC
AGGAAAATAT TAGACAAAGT GCGCGACCTA TTCTTTGCCT CTTCATCTGC CAATCGCTAC
TATATTAAAT TGAGTGCGGT TAAAATCGAG CTGGCAAGCG AGGATTTTGT ATGGTATCGG
TGCGTGAAAT GCGGAAAGTT GTCTCCGTTT AAAATTGGTG ACTATTGTGG CGCTTGCTTT
GATTCGTCCG ATTTAGTTTC CATTGGCGAG GAGGAATTGT CACGCTTTGA CTTCTGGCGC
ATACCTGTTC TAAATGCACT TAAAAAGATA GAAAGCATTC ACACGATTGA TACCGAAGAG
CATACGGCAC AGCTTTCACA CAAAGAGATT CGTAGCGACA CATGGAGTCG CACGGAAAAA
TATGAAATGC GCTTCCAAGA CATAAACGCT GGAGAACACG GCGAAGATGC GATTGATGTT
CTCAGTTGCA CAACAACGAT GGAAGTTGGT ATTGATATCG GCTCTTTGAC TGCGATCGGG
CTTCGTAATA TCCCGCCCAT GAGGGAGAAC TATCAGCAAC GAGCAGGACG TGCTGGACGT
AAGAATGCAG GGATATCAAC TATCGTGACT TACGCCTCTG GAGGTACGCA CGACAGCCAC
TACTTCCAGC ACCCTGATGA AATGATTTCC GGAGCACCGC GTAAGCCGTG GATAGACCGC
AGCAATCCAA AAATTAAACA ACGCCATGTA AATATGCTGA CACTAAACGG GTTTATGTCC
ACGGAAGCTA TGAGAACCCA ATTTGATGGG ATTGTTGATA CAGGGATTAT TAAATTCTGC
GAATTATATG GTGAAAACTT TATTGAGTTT GCAGAGCAAT TTTCTAAAAA CTCAGGGCTG
TCAACGGCTA AAACAATAGA GCATTTCCAA GAAATATGCG GGCTTGTTTT AGCAGAGGGC
AAGCGTGACG AGTATATAAA TAATGATAAA GAAACGCCTG CGTTTGATAT TTTTTACCGC
GAAGGCTTTA TTCCGTCTTA CTCGTTCCCA AAGAATGTTG TAAGGTTCTT CGTTGAAAAG
GAATCCGAGC GCGGCAAAAA TTCGCCAAGG GATATTCAGT ATGCACCCGA ACGTGACATA
GCCGTGGCTC TTAGCGAATA TGCCCCCGGC CGCTTCGTGA CCATCGATAA GAAAATATTT
AAGAGCGGTG GGATTTACGC AAACCCTCGT CCCCGTGGGT TTGAAACCAA TCATGCAGAG
TTTTACTTCA AGAACACTGA CTACTACAAA GACATCTTTA TCTGCTCCGA GTGTAATTGG
TTTGGGCTTC AGGAAGATGC AAGCCTATCT CAATGCCCGT ACTGTGGCTC GGAGATTGTG
AAAAACAAAA TGCTGCGTCC TTGGGGGTTC TCCCCTGTAA AGGGCGATGA AGTAAAGTTC
GAGGATGAGG ACGAGCAATA CACCTATGCC GAAGCCCCGT ACTATTCTTA TGTCCCTGAG
GATACGAGGA TGGACAGCTT TGGGCAGAGT AAAATCCGTT TCGCCAATTT GCCCGACCGC
AAAGTGCTGA CCGTTAATAT GGGGAAGAGT AAAAACGGAT TCAATATTTG CAAAAAATGC
GGAGGAGCGG AGGTAACTGA CGCAAAGGAA GGCGCGACGT ATTCGTTTTC TCAGCCTTAT
CACGATAACC ACCCACTCTG CCGACATGAA GGAACCGTTG CCCACGGCAT TTATCTCGGA
TATGAGTTTC TTACGGATAT GTTTATGCTC GATATATCTT ACGATTCAAC AAAGTTGGTG
GGAAACCGCA GTGCTGAAGA GAAAAGCATC CTTCGTGCGG CTGTAACTAC TTTGCACGAG
GCAGTTAAAA AGGCCGTCTC ACTCGTTTTG GATATTGACT ATAACGAAAT CAGCGGGGGG
TGGCGTCCGA GAATCAAGGG AGACGGTAAC TCGCACATGG AAATGTTTTT CTATGATAAT
CTGACAAGTG GTGCTGGGTA TTCATCGCTT ATTGGCTCGA TTTTGGACGA GGTACTTGAA
CGGGCGCGCA TTATACTGAC TGGGTGCGAA TGTTCACGTT CCTGTAAGAA CTGCTTGGAT
AATTATTGGA ATCAGCGAAA TCATCAATTG TTCGACCGAC ATCTTGGCTT GCAATTACTT
GATTACGCAC AATTTGGACA GTTGCCCGAT GACTACGAAG TTAGCGAACA AAATGAATAT
TTTCAACCAT TGCTGAAACT GATAACCGAG GACGGCGGAG TACCGCCACT CGCATTTGAA
GTTATCCCTG CTATGCGGAA GAAACCCGAC AGTACACGAA GCAAAATGTA CCTCAATCCA
TACGATCTAA CGGATTGGCT ACCTAATGCA TTTATGACAT ATAGAAATCT GGTGAGTGAG
GGATAA
|
|---|
| Protein sequence | MHNPNGVQEY YQAIRDRLKN YIKSDYLANS ETLLLYVDDL LGELCSEYTN IAREPYIETA
ASYKKIQDGI QNSSRIKQGV KESLFKLVAK GLGIFSDPFE HQVKALEYFL AGRDLFVSTG
TGSGKTECFL WPIIAKCFDE AKNHPAIFKN EAVRTLIIYP MNSLVSDQLA RFRKIIGSPD
FKYIFTRDTH ASRIPHFGMY TGRTPYSGDA KKASSQELAI TFRENYLIDE TADAYTQRRQ
TNNIKGLKSI SKYPARFGED GLRVFIENLE KNIHRPSPYD AEFITRFEMQ NCPPDILITN
YSMLEYMLMR QREANIWDKT KEWLETSDEN KLLIVLDEAH MYRGSAGGEI ALLLERLFYR
LGISSEKVQF ILTTASMPQN EQTAINGFYT GLTGKVASSC EFLFGSKEEI PDEQEIRTDI
EALASIDSDQ VQGEAITKRI AAFASSVFKT TLPSDISQDS AQEWLYDNLP KYEAFVKLNR
LCRDGAKSYS EIKEVIFGNV ATSEKALDAL LVLVSLAAKG GNILFPVRLH MFLRGLQGLY
TCSNPKCTRA KQSESEKLPL GKIISIPKDK CECGGKIYEL FNHIKCGALY IRAFVQKNEG
QPYWYVFPKK GLDGDVNSLQ ETLLYVVPKQ YQCGKNDKIG SLDPFTGKLY LTLQDEETLL
DVVYYNKSEK GKKTDAKGMP FNFGVCPKCK KPMPLKKPVD LSTKGNIPFY NLTKSQFELQ
PPKSGLINQG KKVLLFSDSR QNAAKLALDL SKSSDADAFR QAVMLASLLL EVDGKEHSLA
DLYPAFLDAC NQNNLTFFSG TSKDKFDGDK RKFAKSKANA EKRGRTINYS SLLGDYGALP
DNYYEQLLTF FTESPRSFKD IGIGFLAPLS TVLDLCMEYL EDDDISIDKA KLYQLLVLMF
WEVMDDSAAL GETIQDDVRK GLPGRSKSSN FGLSFDFLTA LDKGLLQRIQ EVLCHDAITT
RKILDKVRDL FFASSSANRY YIKLSAVKIE LASEDFVWYR CVKCGKLSPF KIGDYCGACF
DSSDLVSIGE EELSRFDFWR IPVLNALKKI ESIHTIDTEE HTAQLSHKEI RSDTWSRTEK
YEMRFQDINA GEHGEDAIDV LSCTTTMEVG IDIGSLTAIG LRNIPPMREN YQQRAGRAGR
KNAGISTIVT YASGGTHDSH YFQHPDEMIS GAPRKPWIDR SNPKIKQRHV NMLTLNGFMS
TEAMRTQFDG IVDTGIIKFC ELYGENFIEF AEQFSKNSGL STAKTIEHFQ EICGLVLAEG
KRDEYINNDK ETPAFDIFYR EGFIPSYSFP KNVVRFFVEK ESERGKNSPR DIQYAPERDI
AVALSEYAPG RFVTIDKKIF KSGGIYANPR PRGFETNHAE FYFKNTDYYK DIFICSECNW
FGLQEDASLS QCPYCGSEIV KNKMLRPWGF SPVKGDEVKF EDEDEQYTYA EAPYYSYVPE
DTRMDSFGQS KIRFANLPDR KVLTVNMGKS KNGFNICKKC GGAEVTDAKE GATYSFSQPY
HDNHPLCRHE GTVAHGIYLG YEFLTDMFML DISYDSTKLV GNRSAEEKSI LRAAVTTLHE
AVKKAVSLVL DIDYNEISGG WRPRIKGDGN SHMEMFFYDN LTSGAGYSSL IGSILDEVLE
RARIILTGCE CSRSCKNCLD NYWNQRNHQL FDRHLGLQLL DYAQFGQLPD DYEVSEQNEY
FQPLLKLITE DGGVPPLAFE VIPAMRKKPD STRSKMYLNP YDLTDWLPNA FMTYRNLVSE
G
|
|---|
| |