Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2707 |
Symbol | |
ID | 8429693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2865662 |
End bp | 2866867 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 645034982 |
Product | type II secretion system protein |
Protein accession | YP_003192109 |
Protein GI | 258515887 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.315565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGGATA AATACGTTTA TACAGTTGCA ACTGAAGACG GAGTCATTAA AAAAGGTATA CTTAATGCGA ACGGAATTAA CGGTGCGGCT GTAATGCTGC GCAAAAATAA TTATTGGATT ATTGAACTGC GCCAATTAGA ACATCATAGT GCCGGTTATT CACTATTGAG CAAGAGGCCT AAACCTAAAG ATCTGGCAGC TTTTTCAAGA AATTTTGCAT CATTGATTAA TTCAGGTATT CCAATATTAA AAGCATTAAT ATTGTCGATG CAAACAAATA AAAAAAGTTT CAATGTAGTA TTGGATCAGT TGGTTCTGGA TTTGAAGGCA GGTTCGAGTC TTTCCGGGGC TATGTCCAAT TATCCCCGCT TTTTTCCTAA AATTTTTATT GGAATGATTG CCGCGGGTGA ATCGGGCGGT GTCTTAGGGC AAGTTTTAGA TAGATTAGCG ATACATTTCG AAAATGTTTC TTCCTTGTCA GATAAGGTTA AAGCAGCATT GTCATACCCT GTTTTGGTGG TTGCCACTGC CATATTATGC CTGGTATTGA TGATGACCAT GGTTTTGCCG GTTTTTGAAG GCATGCTGCA AGACGTTAAT GCGTCATTGC CATTTATTAC TGTAGTTGTG GTTAAGGTTA ACAAGTTTAT TATGGTTTAC AAATATTTGG GGCTAGGAAT ATTCCTGTTA ATTTGTATTG CTGTATTGTT ATGGATAAGA ACGTCAAAAG GCCGGGAGAT TTCTGATCAT CTTCTTGTCC GTATGCCTTT ATTCGGTACA CTGCTTCGCA AGATAATGCT TGCGCGGTTT TGCCGGACCC TCAGCACCTT GCTTTACAGC GGCATACCGG TTTTGGCATC TCTGCATATA GTTAAAGAAA CTATTGGCAA TGAAATTATA ATCAAAGCTG TCAGCCGGAC CTGCGATTGT ATCGAAAAAG GTGAAAGTAT AGCGGTGCCC CTAAAAGAAA GTGGCTTTTT CCCTCCCTTA TTAATCCATA TGATTACGGT AGGCGAAGAA ACAGGCGCTT TGGGTGAATT GCTGGAAAAA GCAGCAGCTA TTTTAGACCG TGAGATAGAA ACTACAGTAA CAAACATGTC TTCCATGCTT GAGCCTCTGT TGGTACTGAT TATAGGAGGC ATAGTTGGCT TTATATTTAT ATCCGTATTG TTGCCTGTAT ACCAAACACT GGGAGCTTAT GAGTAG
|
Protein sequence | MTDKYVYTVA TEDGVIKKGI LNANGINGAA VMLRKNNYWI IELRQLEHHS AGYSLLSKRP KPKDLAAFSR NFASLINSGI PILKALILSM QTNKKSFNVV LDQLVLDLKA GSSLSGAMSN YPRFFPKIFI GMIAAGESGG VLGQVLDRLA IHFENVSSLS DKVKAALSYP VLVVATAILC LVLMMTMVLP VFEGMLQDVN ASLPFITVVV VKVNKFIMVY KYLGLGIFLL ICIAVLLWIR TSKGREISDH LLVRMPLFGT LLRKIMLARF CRTLSTLLYS GIPVLASLHI VKETIGNEII IKAVSRTCDC IEKGESIAVP LKESGFFPPL LIHMITVGEE TGALGELLEK AAAILDREIE TTVTNMSSML EPLLVLIIGG IVGFIFISVL LPVYQTLGAY E
|
| |