| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2215 |
|---|
| Symbol | |
|---|
| ID | 8429198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2384044 |
|---|
| End bp | 2385909 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645034526 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003191656 |
|---|
| Protein GI | 258515434 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000394108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATA AAAAACAACA AGATAGGCTT CTCAGCCCCT TAACTAAAGA AATCGAGGAA
TTTATTGACT TCAAGCAACA ATCAGGCTCC CTGTATACAA GTTCTGAGTT TGCGCTAAAA
GCCTTTAATA GATTTTGTGC CGCGGTGGAA AACCAAGCCT TGACTCCTCA ACAATTAGCT
GAGGCCTGGG TAAAGTCAGG TGATGATAAA CCAAAATATG ATGGTGGTTG CTGTGTCAGG
CAACTCGGGC AGTACCTTAC CGCGCAGGGG CACCCCAAAG CATTTACTGT ACTCAGCGCT
AAAGGAAACA CCCCTAGGCT GCTTGGTATA AATTCTGGTC CTTTTGTCAG GGAAATCAAG
GAGTTTGTTG ATCAAAAAAG ATCAGCGGGT CGAAAATATA TTTCCGAGGG GTACTGTCTA
AAAGCCTTCG ATAAATTTTG CGCTATGAAG GAGAATGAAT TTTTGACTCC CCAGCAGTTG
GCAGACGCCT GGTGCGGGAA GGTTAGAGAA AAAAACACCG CTAATATTGG GATGATTAGA
GAGTTAGGCA TGTACCTCAC CATGCAGGGT AGTACGAAAT CTTTTGTGGT TCCTTATGCG
AATGGAGATA TGCCAAAACC GCCATTTACC GGGTACACAG GTTCGTTTGC GGAAGAAATC
GTATCGTTTC TTAAAACGAA AAGATCTGCC GGTTTGAAGT ACAGACATGA GGAGTTTCGC
CTAAAGGACT TCGATAAATT TTGTAATGAG CAATCTAATT TGAAATTGTC TCTGCGGCAA
CTGGCTGACG CGTTTATACA TTTCCAAGAG GAACGCGGCT ATTCCAAGAG CAGAAGAAGT
ACCTCCGTTA TTAAAGCATT CGGTAACTAT CTTACTAATA ATGGTTGTTC AAACGCTTTT
ACTATCATTG ATAAAAATTT CGTCGCTGGC CCATATGCGG AAGAGATATC GGCTTTTGTC
GCCTTCAAAA AATCTTGTGG ATTTAAGTAT CTCAATTCCG GTTACCATCT GAGGTCTTTC
GATGTGTTTT GCGCCTCGAA AGAAAACGAA TCTCTGACCC CTCAACAATT GGCTGATAAA
TGGGTTCTAA AAAGAGACAA TGAACATCCG AATACACGTG CTGGCCGGGT AGACCCAGTC
AGAGTTTTCG GCAAATATCT TACAAGCATT GGACATGCCA AAGCTTTTAC GATTGCGGTT
GATGCCGCGC AAAGGAGGTC TCCTAAGCCT CCATATCTAT TTTCAGAAGA CGATATTGAT
ATATTCTTTG GCGCATGCGC TGAATTGAAG CCGGATGAAA AAGAACCATC CATGCACATC
GTTCTTACGG CGGCGTTTTT ATTTATGCAC TGTATGGGTG TCAGGACATG TGAATTAAAA
ATATTGATGG AGAATGTGAA TCTTGAAACC GGCGAAGTCA TCATTATTGA CGCCAAGACC
GGTGAACGGT CTGTGTATAT GAGCGAGGAG TTATCTGAAT TTCTTTTCAA ATACAATTTA
GTGATCGAAA AGATTTTTCC GCGTCACAAG TACCTATTTC CCGCATCCGT AAGCCGATCC
CGTAACGACT TTGCCAAACA CTTCAGGGAA ATATGGACGT CCAATGTCCC CGCCGTGGAG
CATGGGGGAC CCAGGTTATA CGATTTTCGT CACCATCTTC TATATCGAAA TGTTGAATTG
TGTATGCGAA ACGGTGATGA TGTGAATGTC CTGCGGCCAT ATTTAATGAG ACATATGGGG
CATAAGTTGC CGGAGAGTTT CCAATATTAC TTCCATCTAT CACCACCAAT TCGAAAAGAG
GTATCCCAGA TCAAAAAGAG CTTGGACTGG ATGATACCTG ACGTTCCGGA GGTTCCATAT
GAGTAA
|
|---|
| Protein sequence | MAYKKQQDRL LSPLTKEIEE FIDFKQQSGS LYTSSEFALK AFNRFCAAVE NQALTPQQLA
EAWVKSGDDK PKYDGGCCVR QLGQYLTAQG HPKAFTVLSA KGNTPRLLGI NSGPFVREIK
EFVDQKRSAG RKYISEGYCL KAFDKFCAMK ENEFLTPQQL ADAWCGKVRE KNTANIGMIR
ELGMYLTMQG STKSFVVPYA NGDMPKPPFT GYTGSFAEEI VSFLKTKRSA GLKYRHEEFR
LKDFDKFCNE QSNLKLSLRQ LADAFIHFQE ERGYSKSRRS TSVIKAFGNY LTNNGCSNAF
TIIDKNFVAG PYAEEISAFV AFKKSCGFKY LNSGYHLRSF DVFCASKENE SLTPQQLADK
WVLKRDNEHP NTRAGRVDPV RVFGKYLTSI GHAKAFTIAV DAAQRRSPKP PYLFSEDDID
IFFGACAELK PDEKEPSMHI VLTAAFLFMH CMGVRTCELK ILMENVNLET GEVIIIDAKT
GERSVYMSEE LSEFLFKYNL VIEKIFPRHK YLFPASVSRS RNDFAKHFRE IWTSNVPAVE
HGGPRLYDFR HHLLYRNVEL CMRNGDDVNV LRPYLMRHMG HKLPESFQYY FHLSPPIRKE
VSQIKKSLDW MIPDVPEVPY E
|
|---|
| |