Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1790 |
Symbol | |
ID | 8428762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1893542 |
End bp | 1895368 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645034125 |
Product | GTP-binding protein TypA |
Protein accession | YP_003191266 |
Protein GI | 258515044 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0279363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.247565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC AGGAGAACTT AAGAAATATT GCTATAATTG CTCACGTCGA TCATGGGAAA ACCACACTGG TTGACAGTAT GTTAAAGCAA TCCGGTATTT TTCGGGATAA CCAGCATGTG GCTGAACGGA TCATGGATTC CAACGATCTG GAAAAGGAAC GGGGAATAAC CATACTGGCC AAAAATACTT CTGTTCGTTA TGATGAGACC AAGATAAATA TAGTCGATAC TCCCGGTCAC TCGGATTTCG GGGGGGAAGT TGAGCGCGTC TTGAAAATGG TAGACGGTGT GCTGCTTTTA GTGGATGCTT TTGAAGGACC AATGCCGCAG ACCAAGTTTG TCCTGCGCAA AGCACTGGAA CTTAAACTTA TGCCAATAGT AGTAATAAAT AAGATTGATC GCCCGGATGC CAGGATATAT GAAGTGGAAG ATGAAATTTT AGGACTGTTT ATTGATTTAG GCGCCAGCGA AGAACAGCTT GAATATCCGG TAATCTATAC CTCAGCCAGA GCAGGTACGG CCTCTCTTGA TTCAGAACAG TCCGGCACCG ACCTGAGGCC TTTGTTTGGA GCTATATTGG AGCATGTTAA GGCACCGCAG GGTGAAGCAG AGTCTCCGCT GCAGTTATTG GTCAATAACA CCGATTATGA CTCTTATCAG GGACGCATGG CTGTTGGCAG AATCAGCAGA GGTAAAATGA ACAGTGGACA GCAGGTAGCT TTGATAAATC ATGATGGTAA AATTACGGCA GCTAAAATAG GCAGGTTATA CGTTTATGAG GGCCTGGAGA GGGTAGAGGC TCTGGAAGCA GGTTGCGGTG AAATAGTGAC CTTTGCCGGT TTAGCGGAGG TTAATATCGG TGATACAGTG GCCTGTAAGG ATAACCCGCA GCAATTGCCG CCAATTACTG TCGACGAACC TACAATAAAA ATGAACTTTA TAGTTAATGA CAGTCCTTTT GCGGGTCAGG AGGGAAAACA CCTGACTTCA CGGGAAATTC GCGCCCGCCT GTTTAAAGAA ATCGAGAAAA ATGTGAGTAT GAGAGTGGAA GAGACGGCAG ACACCGATGT CTTTGTAGTG AGCGGCAGAG GCGAACTTCA CCTGTCTATA TTAATAGAAA ATATGCGGCG TGAAGCTTAT GAATTGCAGG TATCCAAACC CGAGGTAATC TATAAAAGAG AAGCAGGACA GCTTTTAGAA CCCATGGAAC TGTTGGTTAT TGATATTCCA GAAGATAAGA TGGGCCCGGT AATGGAGATG CTGGGTGTAC GCAAAGGTGA AATGATCAAT ATGATCAGCC AGAGCGGGGG ACAGCTTCGC TTGGAATTCA ATGTTCCGGC TCGGGGTTTG ATTGGTTTTC GTTCTCATCT ACTAACAGAA ACCCGCGGTC ATGCGGTGAT GAATCACACC TTTAACGGTT ACGAGCCTTT TAAGGGGGAA ATGCAAAGCC GCTATCAGGG AGTTTTGGTG GCGCTGGAAA CAGGAGAGGC TACAACCTAT GGTCTTTATT CGGCACAAGA AAGAGGCACA CTGTTTATTA CACCGGGCAC AAAAGTATAT GAGGGCATGA TCGTTGGTGA GAACAGCCGT GAACAGGATC TGGAAGTGAA TGTATGTAAA AAGAAGCATT TGACCAATAT GAGATCCAGT ACAGCTGAAA ACGCATTAAG ATTGGAAGAA CCCAGGCACT TTAGTTTAGA GGAAGCGCTT GAGTATTTAG ATGATAATGA GTTGCTGGAA ATTACGCCTT TGAGCCTGAG ACTGCGCAAA AAAATATTGG ACAAAGACAA CCGTTACAAG GCCAATAAAA ATTCTAAACC GGCATGA
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Protein sequence | MIKQENLRNI AIIAHVDHGK TTLVDSMLKQ SGIFRDNQHV AERIMDSNDL EKERGITILA KNTSVRYDET KINIVDTPGH SDFGGEVERV LKMVDGVLLL VDAFEGPMPQ TKFVLRKALE LKLMPIVVIN KIDRPDARIY EVEDEILGLF IDLGASEEQL EYPVIYTSAR AGTASLDSEQ SGTDLRPLFG AILEHVKAPQ GEAESPLQLL VNNTDYDSYQ GRMAVGRISR GKMNSGQQVA LINHDGKITA AKIGRLYVYE GLERVEALEA GCGEIVTFAG LAEVNIGDTV ACKDNPQQLP PITVDEPTIK MNFIVNDSPF AGQEGKHLTS REIRARLFKE IEKNVSMRVE ETADTDVFVV SGRGELHLSI LIENMRREAY ELQVSKPEVI YKREAGQLLE PMELLVIDIP EDKMGPVMEM LGVRKGEMIN MISQSGGQLR LEFNVPARGL IGFRSHLLTE TRGHAVMNHT FNGYEPFKGE MQSRYQGVLV ALETGEATTY GLYSAQERGT LFITPGTKVY EGMIVGENSR EQDLEVNVCK KKHLTNMRSS TAENALRLEE PRHFSLEEAL EYLDDNELLE ITPLSLRLRK KILDKDNRYK ANKNSKPA
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