Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0275 |
Symbol | rplA |
ID | 8427210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 298212 |
End bp | 298910 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645032673 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_003189851 |
Protein GI | 258513629 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000501108 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000549627 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAAAAC ATGGGAAAAA GTATCAGGAT GCCACCAAAC AGGTAGAGCG GCACCGCCTT TATGAAATGA CTGAAGCACT GGATCTGGTA AAAAAAGTTG CGCCGGCAAA GTTTGATGAG ACAGTAGAAG TAGCCATTAG ACTGGGTGTT GATCCCAGAC ATGCTGATCA GCAAGTGCGT GGTGCTGTTG TATTGCCCAA CGGTACAGGA AAAACCCGTA CAGTACTGGT ATTTGCCAAG GCAGATAAGG TAAAAGAGGC TGAAGAGGCC GGAGCTGATT TTGTAGGTGC CGAAGACATG GTTGAAAAGA TTCAGAAAGA AGGCTGGTTA GGTTTTGATG TGGCTATCGC TACTCCTGAT ATGATGGGTC TGGTTGGCAA GCTGGGGAGA ATTTTAGGTC CCCGCGGCTT GATGCCGAAT CCCAAGACAG GTACCGTTAC TTTTGATGTA GCCAATGCAG TTAAAGAAGT TAAAGCCGGT AAGATTACCT ACCGTGTTGA TAAAGCAGGT ATTGTACATG CCCCTATAGG TAAGGTTTCT TTTGATACCG CTAAAATTGT TGAGAATCTG CGTACTCTGG TTGATACCTT AATAAGGGTA AAACCTGCGG CTGCAAAAGG ACAGTATATC AAGGGAGTTA CTGTTACATC GACCATGGGT CCCGGTGTTA GCATAAATAC CCAGAAGATA ACTGGTTAA
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Protein sequence | MPKHGKKYQD ATKQVERHRL YEMTEALDLV KKVAPAKFDE TVEVAIRLGV DPRHADQQVR GAVVLPNGTG KTRTVLVFAK ADKVKEAEEA GADFVGAEDM VEKIQKEGWL GFDVAIATPD MMGLVGKLGR ILGPRGLMPN PKTGTVTFDV ANAVKEVKAG KITYRVDKAG IVHAPIGKVS FDTAKIVENL RTLVDTLIRV KPAAAKGQYI KGVTVTSTMG PGVSINTQKI TG
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