Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4187 |
Symbol | |
ID | 5714718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009959 |
Strand | + |
Start bp | 33135 |
End bp | 33890 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641277082 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001542378 |
Protein GI | 159046710 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.616361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCCC GCACCCGCAA GCAGGTCCGG CGCGATCAAC TGATCGGCGT GGCGGTGTTT CTGGTCGTCT GGGAGATCAC CGCGCAGATC ATCGACAGGT CGCTCGTCCT GCCGCCGGTG ACCGCGATCC TGGCGGCCCT GTGGGATCTG ATCCTCAGCG GCGAGCTGAT CGTGGCCCTG AGCCAGAGCA TCTTCCTGCT GATCGTGGGG CTCTTCGTGG CAACGGTGAT CGGCTTCGTT CTGGGCGCAC TCATCGCGCG CTCCAGGACC GCCTACTGGA TGCTCAACCC GTATCTCAGC GCGCTCTTCG TGACGCCCAC CATCGCGCTG GTGCCGCTGG TCCTGGTCTG GTTCGGCTTC GGCTTTCCGG GCCGGGTGAT CGTGGTCGTG CTGGCGGCGG TGGTGCCGAT CCTGTTCAGC GTGGCCTCGG GGCTGCGGGA TTCCCCGGGC GACCTGATCG ACGTGGCGCG GTCCTTCGGC GTGAAGGGGG AAATCGCCCT TCTGTTCAAG GTCCGCATCC GCGCCGCCTT GCCGGTGCTG CTGGCCGGTC TGCGACTGGC GGCCGGGCGC GGCGTGGTCG GCATGGCCGT GGCGGAAACC TATCTGCGCC TCGGCGGGAT CGGCGGGCTG ATCAAATCCT ACGGCGCGAT GTTCCAGACC GATTACGTCT TCGCCTCCAT CCTGCCGCTG TCGCTGCTGG GCATCGCCAT GGTCTCGGCC ATCGGCTGGG TCGAGCGTCG GCTGCATTGG ACATGA
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Protein sequence | MKARTRKQVR RDQLIGVAVF LVVWEITAQI IDRSLVLPPV TAILAALWDL ILSGELIVAL SQSIFLLIVG LFVATVIGFV LGALIARSRT AYWMLNPYLS ALFVTPTIAL VPLVLVWFGF GFPGRVIVVV LAAVVPILFS VASGLRDSPG DLIDVARSFG VKGEIALLFK VRIRAALPVL LAGLRLAAGR GVVGMAVAET YLRLGGIGGL IKSYGAMFQT DYVFASILPL SLLGIAMVSA IGWVERRLHW T
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