Gene Dshi_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4179 
Symbol 
ID5714710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp28217 
End bp28627 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID641277074 
Producthypothetical protein 
Protein accessionYP_001542370 
Protein GI159046702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.865834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC CCGACCGCCA TGATCCCGCG CCACAGGATG CGCCTGCCCT TCTGTCGGAG 
TTGATGCAGC ATCTCCGCGG CCTGGTGGAG GCCGAAATTG CCCTCGCCCG GGCCGAGATC
CGCCGCAAGC TGTCCGATGC GGGGACCGGC GTGACTCTGG TGCTCTGCGC CATCCCCCTG
GCCCTTGTCG GGCTCGGGCT GATACTGACG GCCCTCGTCG GGGCGCTTCT GGCACTCGGC
TGGCCGCTTT GGCTGGCGGC GCTGGTGCCC GGGGCGGTGT GCCTGGTGCT CGCGGCCCTT
CTCGCGCTGG TTGGGAAATC CCGCCTCTCG GTCGCGGCGC TCACACCGCA AAAGATCCTG
AGCCATGTCC GCAAGGACCT CCAGATGTTG AAGGAGACGA CCCATGCCTG A
 
Protein sequence
MDNPDRHDPA PQDAPALLSE LMQHLRGLVE AEIALARAEI RRKLSDAGTG VTLVLCAIPL 
ALVGLGLILT ALVGALLALG WPLWLAALVP GAVCLVLAAL LALVGKSRLS VAALTPQKIL
SHVRKDLQML KETTHA