Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4159 |
Symbol | |
ID | 5714729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009959 |
Strand | + |
Start bp | 6606 |
End bp | 7658 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641277054 |
Product | alcohol dehydrogenase |
Protein accession | YP_001542350 |
Protein GI | 159046682 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.44287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGG CACGTTGGCA TGGCGCGAAG GACATTCGCG TCGAGGATGT GGACGAACCG ACCCCCGGCG CGGGGGAGGT CAAGATCAAG GTCGCCTGGA CCGGGATTTG CGGCAGCGAC CTGCATGAAT TTCTCGCTGG GCCGATCTTC GTGCCGGTGG GGGAGGATCA CCCCCTCAGC CACGACAAGG CCCCGATCAC CATGGGACAC GAGTATTGCG GCGAGATCAC CGAGCTGGGC GACGGGGTCA CGGACCTGTC GGTCGGGGAC CGGGTGGCGA TCGAGCCGAT CTTCGCCTGC GGCACCTGCG CGGCCTGTCG CGACGGGCGG TACAACCTGT GCGAAAAGCT GGGCTTCGTC GGCCTGTCCG GTGGCCATGG CGGGTTTGCG GCCTATTCGG TGGTGCCCGC GCGCATGTTG CACAGGATGC CCGAGGGCCT GTCGATGGAA CAGGGCGCGC TGGTCGAGCC GGCGGCGGTC GCCCTGCACG CGGTACGGGT CAGCGCGTTC AAGGCCGGGG ACAGGGCGGC GGTGTTCGGG GCCGGTCCCA TCGGGCTGCT GGTGGTCGAA TCGCTCCGGA TCGCGGGGGC CTCCAAGATC GTGGTGGTCG AGCCGTCCGA GACCCGCCGC GCCAAGGCCA TGGAGTTGGG CGCGACCACG GCGGTCGATC CCGGGGCGGA GGATGCCGTC GCCGCCGTCC AAGCCGCATG CCCGGGGGGC GTCGAGGTTG CCTTCGAGGT GACCGGCGTG CCCGCGGTGC TGGCGCAAGC CATCGACGCG ACCCGCTACG AGGGCGAGAC GCTGGTGGTG TCGATCTGGG AAACCGAGGC CAGTTTCCAG CCCAACACCG TGGTTCTGAA GGAGCGGAAC ATCAAGGGGA CGATTGCCTA TCGCAACGTC TATCCGGCGG TGATGGACCT GATGCAGCAA GGCTATTTCC AGGCCGAACG GCTGGTGACG CGCCGGATCG GGCTGGACGA TATCGTGCGC GACGGGTTCG AGGCGCTGGT GGCCGAGAAA TCCCAGATCA AGATCCTGGT CGAAGCGCCC TGA
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Protein sequence | MKAARWHGAK DIRVEDVDEP TPGAGEVKIK VAWTGICGSD LHEFLAGPIF VPVGEDHPLS HDKAPITMGH EYCGEITELG DGVTDLSVGD RVAIEPIFAC GTCAACRDGR YNLCEKLGFV GLSGGHGGFA AYSVVPARML HRMPEGLSME QGALVEPAAV ALHAVRVSAF KAGDRAAVFG AGPIGLLVVE SLRIAGASKI VVVEPSETRR AKAMELGATT AVDPGAEDAV AAVQAACPGG VEVAFEVTGV PAVLAQAIDA TRYEGETLVV SIWETEASFQ PNTVVLKERN IKGTIAYRNV YPAVMDLMQQ GYFQAERLVT RRIGLDDIVR DGFEALVAEK SQIKILVEAP
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