| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4119 |
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| Symbol | |
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| ID | 5714663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 50748 |
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| End bp | 51629 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641277021 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001542317 |
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| Protein GI | 159046648 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0363695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC GGGTTCTGGT TCTGGGGGCG ACGGGGCGGC TGGGCGGGAT GCTCCGGCGG
CACTGGGGCG CATGGCCCGA TCTGGAGCCG CTTTGGCAGG CCCGGCAGGG GGCGGTGCGC
GGGGCCGGGG ACTGGGTGGT GTTCGATCCG CGCACGGACC CGCTGGCCCT GGCGCAGGCC
TGCGGCCGGG TGGACGTGGT GCTCGACCTG GCGGGGCCGG TCCCGGCACC CGGGCGTGCG
ATCGACAGTT TCGCGGCCAT CGCGCCGCTC GCCCGGGCCG TGGCCCATGG GGCGCGCGTG
GCGGGGGGGC GGCCCTTGCT CTGGGCCTCG TCGGCGGCGG TCTACGGGGC GCGGGCGCTC
TGTGCCGAGG ATGATCCCCC GTCCCCCCTG AGCGAGTACG GCCGGGCCAA GGCGGCGGGC
GAGGCGGCGC TGGCGGGCCT GCCCGGGGCC TGCGTGCTCA GGATCGGCAA TGTGGCGGGG
GCCGATGCGC TGTTGTCTGC CGCGACCCCG GGGGTGCCGG TGAGCCTGCA CCGCTTTGCA
GATGGCACGA CCCCGCGGCG CAGCTATCTC GGGCCTGCGT CCCTGGCGGC GGTGCTGGCG
GGGCTGGTGC GGCAGGCGGC GGGGCCCCCC TTGCCCGGCG TGCTCAACCT CACCGGGCCC
GGCCCGGGGG TGGAGATGGC CGCCCTGCTG GCCGCCGCGG GCCTGCGCTG GCGGCCCGTG
CCCGCGCCGG AGGCGGCCCT GGCGGAGGTG GTGCTGGACA CCGCGCGCCT GGCCGGGCTG
GTGGCGTTGC CGCCCGAGGC GGGCACCGCC CGGGGTATCG TGGCGGAATG GCGGGCGGAC
ACGGCCCTGA AACAGGCTCT TTGCAAGGAG ATTTCCCCGT GA
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| Protein sequence | MTVRVLVLGA TGRLGGMLRR HWGAWPDLEP LWQARQGAVR GAGDWVVFDP RTDPLALAQA
CGRVDVVLDL AGPVPAPGRA IDSFAAIAPL ARAVAHGARV AGGRPLLWAS SAAVYGARAL
CAEDDPPSPL SEYGRAKAAG EAALAGLPGA CVLRIGNVAG ADALLSAATP GVPVSLHRFA
DGTTPRRSYL GPASLAAVLA GLVRQAAGPP LPGVLNLTGP GPGVEMAALL AAAGLRWRPV
PAPEAALAEV VLDTARLAGL VALPPEAGTA RGIVAEWRAD TALKQALCKE ISP
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