| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4021 |
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| Symbol | |
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| ID | 5714550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 87675 |
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| End bp | 88910 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641276933 |
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| Product | replication initiation protein RepC |
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| Protein accession | YP_001542229 |
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| Protein GI | 159046559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0836066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTACA CGCCCGTAAC GCCGTTCCGG CGAACGATAG ATGCTGCCAT CCTGAAACAT
CAGGCAGCGA CCCAAGAAGA CCTGCCCCCA GCCGGCGCCA ACAAGTGGGA GGTCCTGAGG
GAGCTCGCTG CCGCTCGAGT CGCGTTCGGC TTGTCCGATC GGGATTTGAC GGTGCTTCAG
GCGCTGGTCA GCTTTCACCA AGCGACAATT CTCGGAGGCA ATGACAGCGA ATTGATTGTA
CATCCGTCCA ACAAGGCGAT TTGCGAGCGC CTGAACGGCA TGCCCTGCTC GACGATGCGG
CGCCACCTCT CCAACCTTGT GCAGACTGGC TTTGTTGTCC GGCGCGATAG CCCCAATGGG
AAGCGCTATG CCCGCCGCTA CGGCGACGAA AAGGTTGCGT TTGGGTTCGA CCTCTCTCCG
CTCGTTCGAC GCTTCCAGGA AGTTTGTGAG GCTGCTGAGA CCGTCCGGGC CGCAGAAGAG
CGGTACAAGC GCCTACGTGC CACTGTGAGC CTCATGCGGC GTGACCTCGC AGGGCTGGCC
GAGTACGGGC GCTCACTTCG TCCGGATCAG GGCGTCTGGG ACCAATTCTC TGATCTTGCG
GCCCTAATGG CCCGAGATCT TCGCAGAAAA CTCGAAATGG AAGACCTTAG GCGCATCGAA
GACGCTTTGG GGTCAGCTTT AGATCACGCC CGAAGCCTTC TGGATGGCTG TGAAACAGAA
AATATGAGCA CCAATGATGC TGTTTCTGAG CAGCATTATC AGAATTCAAA TAAAGACTCT
TATGATCTTG AACCTCGCTT AGAAAAAGCG CGGGGCGGAG GCGCTGTGCG CGAAACTCCA
GAAGTTGCCA ATAGTCATCT GTGTTCTGAA GATGAGGGCA ACTCAACGGC AACTATTGAC
GATCAACTGA TGCCGAACAT ACCGCTTGGT CTCGTCCTCG CTTCCTGTCA GGAATTCAAA
GCGTATTCCG AGCAGCCCGT GCGCCACTGG CACGATCTGG TCCGGGTGGC TGATGTGGTC
AGGCCCATGA TGGGTATTTC CCCGTCCGCG TGGGACGAGG CGAAACGCTA TATGGGTCCC
GAAGAAGCGT CTGTTGTGAT CGTTGCAATG CTTGAACGGT TTGCGGATAT CCGATCACCT
GGAGGCTACT TGAGAACCCT ATCTTCAAAG GCAGCAATTG GGGAGTTCTC CTGCGGTCCG
ATGATCATGG CCTTGATGCG GCGGGATGCT GCATGA
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| Protein sequence | MDYTPVTPFR RTIDAAILKH QAATQEDLPP AGANKWEVLR ELAAARVAFG LSDRDLTVLQ
ALVSFHQATI LGGNDSELIV HPSNKAICER LNGMPCSTMR RHLSNLVQTG FVVRRDSPNG
KRYARRYGDE KVAFGFDLSP LVRRFQEVCE AAETVRAAEE RYKRLRATVS LMRRDLAGLA
EYGRSLRPDQ GVWDQFSDLA ALMARDLRRK LEMEDLRRIE DALGSALDHA RSLLDGCETE
NMSTNDAVSE QHYQNSNKDS YDLEPRLEKA RGGGAVRETP EVANSHLCSE DEGNSTATID
DQLMPNIPLG LVLASCQEFK AYSEQPVRHW HDLVRVADVV RPMMGISPSA WDEAKRYMGP
EEASVVIVAM LERFADIRSP GGYLRTLSSK AAIGEFSCGP MIMALMRRDA A
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