| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3699 |
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| Symbol | |
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| ID | 5714229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 103864 |
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| End bp | 106374 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641276617 |
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| Product | putative methylase/helicase |
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| Protein accession | YP_001541913 |
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| Protein GI | 159046241 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2263] Predicted RNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGC ACCGCTCAAC GCTCCCCAAT CCTGTTGAAT CCAACGCTAA CCTTACCTCT
GCCCTCGCGC AGATCGGCGC GGAGGTCGAC CACCAACCCC TGCGCAGTTC AGCGCTGGCG
CGCATCATGC GCGAGACGTT TCATGGCAGC GATGCCGGGG GCGCCTGGGA CTGGCGCATA
GCCTATGACC TGATGCAGGC CGCGGCTGTC CAAGTGCTGC TGCGTGGGAA CGGCGTGGCA
GATGACATCG CCGCTGCAAA GCTGCTTGCC TCGCGGCTGC TGACGGAAAC CCGCCGGTCA
GAGCAGCAGA TCCGGCTGCA GCAGTTTTCC ACGCCGCTGC CATTTGCGGC GCTGGTCTTG
CGGGCGGCGG CGATCCGCAA GGGCGAGACC GTTCTGGAGC CCTCGGCTGG CACAGGTGCC
CTGGCTGCTT TCGCCGCCCG GGCCGGTGCC ACGCTTTTGC TCAATGAAAT CGACCCCTTT
CGCCAGCGCC TCCTGCGCGC GGTTTTCGGC GGCGAGGTGA CGGGCCATGA CAGCGAGCAT
ATCGACGATC TGCTGCAGAC GCCGGTTCTA CCCGACGTCG TGGTGATGAA TCCGCCCTTC
GCCTCCTCGG TCGATCGCTC CCGGGACAAG TACATCGCCG CCAAACATCT CGTCGCGGCT
GCCAAGCGTC TGGCACCCGG CGGGCGGCTG GTGGCGATCA TGCCGCCGGG ATTCACGCCC
GAACGCGATG CCGCGCATTG GTCCCGCGCC TGCGGTCTCC TGACGCCGCG CTTGGCGCTG
ACGATGCCGG GGCAGGTCTA TCGCAAGCTT GGCACCTCTG TGGAAACCCA GCTGATGGTC
TTCGACAAGG TGCAGGAGGA CGGCGAAATG ATCCGCGTCC CTGTGCGGGA TCTGGATGAA
GCCCTTCCTT TTGTCGACGC AGTGGCCGCA ACCCGGCCCG AGATGCGCCC CGCCCAACGG
GCTGAAGCGA CCCCTCATGC TCGGCCGACC GTTCCATCCT CTGCCCCGCG CAAGACCGCG
GCTGCGCCTG TCGCCGCCTC CAAACCACGG GCCAATGCCG TCCGCCCGCT CAGCTTCACA
AGCTTCGATG TCCCGCGCGA CAACACGCCC ATCTCGGACA TCTATGCGCG CTACTGGCCG
CAGCGGATCG AGATCGCGGG CGCGCAGGAA CATCCCACGC CGCTCGTTGA AAGCATCGCC
ATGGCCTCGG TTGCCCCGCC CATGCCCTCA AACACGGGCA GTGATGACTT GCGACTGCCC
GCACGGTTGA TCGAGGAGGG AGATCTCTCC GAGGCGCAGC TGGAAACCAT CATCATGGCG
CATGATGCTC ATGGGCGCGA CCTGCCCGGT CGGTTTACCA TCGATGACGA CCAGACCAAG
CTGACGCGCG CCGATGATGA TCCAGACGCA CGTGCCTATC GCCTCGGCTA TTTCCTCGGC
GACGGCACCG GTTGCGGCAA GGGGCGCGAA TGCGCGGGGC TGATCCTGGT GAACTGGCTT
GCCGGGCGCA GGAAAGCGAT CTGGGTTTCC AAATCCGCCA CGCTCATCGA GGACGCGATC
CGCGACTGGA CCGATCTTGG CGGCTCGCCT GCCGACATTC AGCCACTTTC CAAATGGAAA
CCGGACCAGC CCGTCCCTAT GGGTGACGGA ATCCTCTTCG TCACCTACGC CACGCTGCGG
TCTGCCGGCA AATGCGGCAC CACGCGACTG AGCCAGATCC TCGCCTGGAT GGGCGCGGAG
TTCGAAGGCG TGCTGGCCTT TGATGAGGCC CATGCCATGC AGAACGCGGC CGGGTCCGAG
CAGGGCAGGG GGGTCAAACC CTCCCAGCAG GGCCTTGCTG GCCTGCGGCT GCAACTGGCA
GCACCCCGCG CTCGCGTCTT CTACATCTCG GCCACGGGTG CCACGAGCGT GCACAACCTG
GCCTATGCCG CGCGTCTTGG TCTCTGGGGG CAGGGGCCGG AATACCCCTT CCCGAGTCGC
GAGAGTTTCG TCTCGGCGAT GGAAGCCGGC GGTGTCGCCG CCATGGAGGT GGTTGCCCGC
GATCTCAAGA CGCTTGGGCT CTATACGGCC CGCGCCCTCA GTTTTGATGG GGTGGAGTAT
GACGTGCTCG AACACGCGCT CACCCCGGCC CAGATTGAGA TCTACGACGC ATACGCGACC
TCGTTTCGGA CGATCCATCA CAATCTCGAG GCCGCGCTGA CAGCGACCGG CGTCAACGAT
GCCTCGGGCG AGACCAATGC CTCGGCCGCA CGCGCCTCGG CCAAATCTCG CTTCGAGAGC
ACGAAACAGC GCTTCTTCAA CCATCTCCTG ATGGGCATGA AGGCTCCAAG CATCATCCAC
GCCATCAAGG ACGATCTGGC AGCGGGCAAG GCTTGCGTCA TCCAGGTTGT CTCTACAGGC
GAAAGCCTGT TGAAGCGTCG GCTTGAGACG ATGGACCCGG AGGATGAACT CGTCGAGGGT
GCCTTGACGC CGCGTGACTA TGTTTTATCC AAAGCTTTGG ATAAGACGTA A
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| Protein sequence | MSKHRSTLPN PVESNANLTS ALAQIGAEVD HQPLRSSALA RIMRETFHGS DAGGAWDWRI
AYDLMQAAAV QVLLRGNGVA DDIAAAKLLA SRLLTETRRS EQQIRLQQFS TPLPFAALVL
RAAAIRKGET VLEPSAGTGA LAAFAARAGA TLLLNEIDPF RQRLLRAVFG GEVTGHDSEH
IDDLLQTPVL PDVVVMNPPF ASSVDRSRDK YIAAKHLVAA AKRLAPGGRL VAIMPPGFTP
ERDAAHWSRA CGLLTPRLAL TMPGQVYRKL GTSVETQLMV FDKVQEDGEM IRVPVRDLDE
ALPFVDAVAA TRPEMRPAQR AEATPHARPT VPSSAPRKTA AAPVAASKPR ANAVRPLSFT
SFDVPRDNTP ISDIYARYWP QRIEIAGAQE HPTPLVESIA MASVAPPMPS NTGSDDLRLP
ARLIEEGDLS EAQLETIIMA HDAHGRDLPG RFTIDDDQTK LTRADDDPDA RAYRLGYFLG
DGTGCGKGRE CAGLILVNWL AGRRKAIWVS KSATLIEDAI RDWTDLGGSP ADIQPLSKWK
PDQPVPMGDG ILFVTYATLR SAGKCGTTRL SQILAWMGAE FEGVLAFDEA HAMQNAAGSE
QGRGVKPSQQ GLAGLRLQLA APRARVFYIS ATGATSVHNL AYAARLGLWG QGPEYPFPSR
ESFVSAMEAG GVAAMEVVAR DLKTLGLYTA RALSFDGVEY DVLEHALTPA QIEIYDAYAT
SFRTIHHNLE AALTATGVND ASGETNASAA RASAKSRFES TKQRFFNHLL MGMKAPSIIH
AIKDDLAAGK ACVIQVVSTG ESLLKRRLET MDPEDELVEG ALTPRDYVLS KALDKT
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