| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3682 |
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| Symbol | |
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| ID | 5714212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 86804 |
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| End bp | 88186 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641276600 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001541896 |
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| Protein GI | 159046224 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.399219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGGC CAAGGCAGGA AGCACAGGCG GCACTGTTTT ACGAGTTTTC GCTGGAGGAG
CATGTCCCGC AGGACCACCT TTTGAGATCG ATTGATCGGC ATCTCGATCT GAGCAGCATC
CGGGGGCATT TGGCAGATTT CTATAGCCAC ACGGGGCGTC CATCTGTCGA TCCTGAGCTG
ATGATCCGGA TGCTGTTGGT CGGATACTGT TTTGGCATCC GGTCAGAGCG GCGGCTCTGC
GAAGAGGTGC ATCTGAACCT GGCATACAGA TGGTTCTGCC GCCTTGAACT GACAGACCGC
ATCCCGGACC ATTCGACATT TTCCAAGAAC CGGCACGGCC GCTTCCGTGA CAGTGACCTC
TTGCGTCATG TGTTCGAGGC GACTGTTGCG CGCTGCATTG AAGAGGGTTT GGTCGGCGGC
CAGGGCTTTG CGGTCGATGC CAGCCTGATC AGCGCGGATG TCCAGAAGCA GAACTCGAGC
AATCCCGAAG GCTGGGCGGC CCGCGAGATT GATCCCACGG ATGCGCCCCG CGCGGTGCGG
GAGTATCTCG ACACTTTGGA CGATGAAGCC TTCGGTGCAG CGACAACAGC AAAACCCAAG
TTCACCGCCC ATGCCGATCC GGCCAGTCAA TGGACGGCTG CGCGCAAAGG GCCTGCATTC
TTTGCCTATT CTGACAACTA CCTGATCGAC ACCGATCACG GGATTATCGT TGACGTGGAC
GCCAGCCGGT CGAACAAGAC CGCCGAGGTC GGTGCCATGC GGAAGATGCT CGACCGGACC
GAAGACCGGT TTGGCGTGAA GCCCGATTGG ATCGCTGCTG ACACCGCCTA CGGATCGTCA
GACAACCTGG TCTGGCTGGC ACTCAAGCGC CAGATCCTCC CCTTCATCCC TGTCTTTGAT
AAAGGTGAAC GGACCGACGG AACCTTCTCG CGGTCCGACT TCACGTGGGA TGACGAGAAC
GATCGCTACA TCTGCCCGAG TGGAAAGGAG ATGCGCCACA CATGGCGGAC CTATTCCGAT
CCCGCGCGAA ATGCACCAGC TTGGAAAGCC CGCAGATATC GGACGCGGAA GTCTGATTGC
ACGGGATGTG CGCTGAAGGC CAAATGCTGC CCCAACTCGG AGGTCCGTGC GATCCATCGC
GAGAAATATG AGATCGTCCG AGACTTCGCC CGCCAATGCA CCGCCTCAGA GTACAATCCA
ACTGCCCAGA GGCGGCGAAA GAAAGTAGAG ATGCTCTTTG CCCACCTTAA ACGCATCCTC
GGCCTGGGCC GGCTCCGATT ACGTGGCCCA TGCGGCGTCC AAGACGAGTT TACCCTCGCA
GCCACCGCCC AAAACCTTCG GAAACTAGCA AAACTCAAAC CCATGGTGCC GGCCACAGAA
TGA
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| Protein sequence | MMGPRQEAQA ALFYEFSLEE HVPQDHLLRS IDRHLDLSSI RGHLADFYSH TGRPSVDPEL
MIRMLLVGYC FGIRSERRLC EEVHLNLAYR WFCRLELTDR IPDHSTFSKN RHGRFRDSDL
LRHVFEATVA RCIEEGLVGG QGFAVDASLI SADVQKQNSS NPEGWAAREI DPTDAPRAVR
EYLDTLDDEA FGAATTAKPK FTAHADPASQ WTAARKGPAF FAYSDNYLID TDHGIIVDVD
ASRSNKTAEV GAMRKMLDRT EDRFGVKPDW IAADTAYGSS DNLVWLALKR QILPFIPVFD
KGERTDGTFS RSDFTWDDEN DRYICPSGKE MRHTWRTYSD PARNAPAWKA RRYRTRKSDC
TGCALKAKCC PNSEVRAIHR EKYEIVRDFA RQCTASEYNP TAQRRRKKVE MLFAHLKRIL
GLGRLRLRGP CGVQDEFTLA ATAQNLRKLA KLKPMVPATE
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