Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3624 |
Symbol | |
ID | 5714154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 25911 |
End bp | 26531 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641276542 |
Product | cation efflux protein |
Protein accession | YP_001541838 |
Protein GI | 159046166 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.383775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGC AGAGAAACGC AACGGAAAGA CGCACACTCT GGATCGTGCT GGGTCTCAAC ATCGGGCTGG CAGTCGCTTT CTTCGCCTCG GGCGCATTCG GCGAGTCAAG CGCGCTTATC GCCAATGGCC TCGACAATCT GTCGGACAGT TTCGTCTACG CGATCAGCCT CTTCGCGCTG TCCCGCTCCG CCAAGTGGAA GCGCGGAGCG GCGAACGTTT CGGGCGGCCT GCTGATCCTC TTCGCCCTTG GAATCCTGTA TGACGCGTGG CGCCGCTACG TCGGCGGATC GGATCCTCTT GGCACGATCA TGATTGTCAT GGCGCTGGTA GCGGCGGCCA TCAACGCACT TTGCGTCTGG CTGCTGGCAC GGCTTCGCGA TCCAGACGTA AACATCCGAG CGGCGAATAC GTTCAGCTGG AACGACTTCG CGGCCAATCT CGGAATCGTC GTCGCAGGCG GGCTCGTAGC CTGGCTCGGA ACGAATTGGC CGGACCTTGT CGTGGGCGTG ATTGTCGCCG GCATCGCGGC CTGGGGTGGC GTCGGAATCC TGAGAGACGC GCATGGTGAA CACCACAAGG CGGTGCACAA TGACGATCAG GTAACCAAGG ACTCGGCCTG A
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Protein sequence | MAEQRNATER RTLWIVLGLN IGLAVAFFAS GAFGESSALI ANGLDNLSDS FVYAISLFAL SRSAKWKRGA ANVSGGLLIL FALGILYDAW RRYVGGSDPL GTIMIVMALV AAAINALCVW LLARLRDPDV NIRAANTFSW NDFAANLGIV VAGGLVAWLG TNWPDLVVGV IVAGIAAWGG VGILRDAHGE HHKAVHNDDQ VTKDSA
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