Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3623 |
Symbol | |
ID | 5714153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 25400 |
End bp | 25828 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641276541 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001541837 |
Protein GI | 159046165 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGA TTGGGACGCT GGCGAAGAAG ACCGGAACAA AGGTGCAGAC CATCCGGTAT TACGAGCAGA TCGGACTTAT GCCTGAGCCC GGCAGGACCG AGGGGGGCCA ACGACGCTAT GGCGACGCCG AACTCGACCG CTTGTCATTC GTCCGGCACG CACGGCAACT GGGGTTCTCG TTGGACGCGA TCCGTGAGCT CCTCGATCTC AGCGATCATC CGGGAAAGTC CTGCGCTGAG GCGGATGCAA TAGCCCGTCG GCAACTCAAA CAGGTCGAGC AACGATTGGC GCGGCTCGAG GCGCTGCGGA CGGAATTGAA GCGGATGGTG CATGAGTGCA GCGGCGGACA GACTTCTGAT TGCCGTGTGC TCGAGGTACT GCGCGACCAT TCCGAATGCC TGACCGACCA TGAAGAGATC GGCGCCTGA
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Protein sequence | MLTIGTLAKK TGTKVQTIRY YEQIGLMPEP GRTEGGQRRY GDAELDRLSF VRHARQLGFS LDAIRELLDL SDHPGKSCAE ADAIARRQLK QVEQRLARLE ALRTELKRMV HECSGGQTSD CRVLEVLRDH SECLTDHEEI GA
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