| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3578 |
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| Symbol | |
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| ID | 5713809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3768197 |
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| End bp | 3769435 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269507 |
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| Product | glycosyl transferase |
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| Protein accession | YP_001534912 |
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| Protein GI | 159046118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.643047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG AGGGCATGCG CCTGAACCAG GATCCCTTGC CCCTGTTGCT CGACGTGACC
CGGCTGGCCT CGCGGATCGG GGACAGGCGC TTGTCCGGCG TCGACCGGGT GGAGGCGGCC
TATCTACGCT TTGTTCTGTC GCAACCGGAC ATGCCCTATG GGCTGGTGCG GTCCGGCTTC
GGCTACCTGC TGCTCGATCG CGCGGGGTTG CAGCCGCTCT GCGATGCCGT GGCCGATGAA
ACGATCTCCT GGGGGCGTCC GGACCTGTTG TCCCGGCTGG CGCGCCACCG CTCCAAGGCG
CGCGCGGGGG TCGAGACGAC CTTGCGCGCG CTCTCCATCG CGCGGGCGCC GCGTTCGGGG
CTGGGCCGGA TGCTGCGCAA ATGCCTGCCC GACGGGGCCC ATTACCTGAA CGTGGGCGAG
ACGAATTTCG ATGGCCCGGT CGCGATGGCC CTGCGCGGTC TGCGCCGCAG CTGGATCGAC
ATGGTGCTGC ATGACACCAT TCCCTGCGAC TTTCCCGATC TCGTGACCCC GGCCTCCGCC
GCGCGGTTCG ACAAGCGCCT GCGCGCGATG CGCACACATG CGGATCGGAT CATCACCGCC
ACCTGGGCCG TGCAACAGGC CGGGTGCCGC CACCTGGGGC TTGGATCGGA GGACGCGCGC
TGGTGCGTGG CGCCCTTCGG GCTCGACCTG CCGGAGCCCG ACGCCAAGGC CCCCGCCCGG
CACGGGCTGA CCCGGCCCTA CATGCTGGCG CTGGGGACGT TGGAGCCGCG CAAGAACATC
ACCTTCCTGC TGGAGATCTG GCGGCAGGCA ACCGCCACGG GCAGCGCCAT GCCGGACCTC
GTTCTCTGCG GTGCGCGCGG CTGGTATCCG GCGAAGGTCT TCGCCGCGCT GGACGCCGAC
CCGCTGCGCG GTGTTCATAT CCACGAGATC AACGATGCCC TGGATCCGGA AGTCGCGGGC
CTGATCGAAG GGGCCGAGGC GCTGCTGTTT CCCACCGTGG CCGAAGGCTT CGGCTTCCCG
CCGCTGGAGG CCATTGCCCT GGGCGTGCCG GTGATCTGCA GCGATCTGCC CGTGCTGCGC
GAGACCCTCG GGGCCTTGCC CGTTTACGTG GCCCCCGGGG ACAGCTACGC TTGGACATCA
AAAATTAAGC AAGGTTGTGC AAAACCGGAT CCGACCGCTG TGGAGGCCCT GCTGGACCGG
TTCACCTGGG AGCAGCACTT CGCCCGGGTG TTCGGCTGA
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| Protein sequence | MAAEGMRLNQ DPLPLLLDVT RLASRIGDRR LSGVDRVEAA YLRFVLSQPD MPYGLVRSGF
GYLLLDRAGL QPLCDAVADE TISWGRPDLL SRLARHRSKA RAGVETTLRA LSIARAPRSG
LGRMLRKCLP DGAHYLNVGE TNFDGPVAMA LRGLRRSWID MVLHDTIPCD FPDLVTPASA
ARFDKRLRAM RTHADRIITA TWAVQQAGCR HLGLGSEDAR WCVAPFGLDL PEPDAKAPAR
HGLTRPYMLA LGTLEPRKNI TFLLEIWRQA TATGSAMPDL VLCGARGWYP AKVFAALDAD
PLRGVHIHEI NDALDPEVAG LIEGAEALLF PTVAEGFGFP PLEAIALGVP VICSDLPVLR
ETLGALPVYV APGDSYAWTS KIKQGCAKPD PTAVEALLDR FTWEQHFARV FG
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