Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3489 |
Symbol | cca |
ID | 5713720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3669395 |
End bp | 3670543 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641269418 |
Product | CCA-adding enzyme |
Protein accession | YP_001534823 |
Protein GI | 159046029 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTTC TCGCCAGCCG ACTGTCCCAT CCGGGCGCGC AGCACGTGCT GGGCGTGCTG ACCGGGGCGG GCCACGCGGC CTATTTCGTG GGCGGCACCG TGCGCAACGC CCTGATCGGG GCGCCGGTCA CCGATTTCGA CATCGCCACC GCCGCCCTGC CGCAGCAGGT GCAAACCCTG GCCGAGGATG CAGGGATCAA GGTCGTGGCC ACCGGGATCG ACCATGGCAC CCTGACCCTC GTGCTCGACA AGACCCCGTT CGAGGTCACC ACCTTCCGCC GCGATGTCGC CACCGATGGC CGCCGCGCCA CCGTGGCCTT TGCCAAGGAC GTGGCCGAGG ATGCGCGACG CCGCGATTTC ACCATGAACG CGCTCTATGC CACGGCGGCG GGGGAGGTGG TCGACCCCTT GGGCGGGCTG CCGGATCTCG AGGCGCGGAA GGTTCGTTTC ATCGACGATC CCGAGGCCCG GATCCGCGAG GATTACCTGC GGATCCTGCG CTTCTTCCGC TTCACCGCCT GGTATGGCGA CCCGGCCAAG GGGATCGACG CCGAGGGGCT GACGGCCTGC GCGGCCCTTG CCGACGGCCT GCAAACCCTG TCGACGGAGC GGGTGACCGC CGAACTGTTG AAGCTGCTGG CCGCCCCCGA TCCGGCCCCG GCCGTGGCCT CCATGGGCCA GAGCGGCATC CTCTCCCGGG TGTTGCCGGG GGCCGCCGAT ACCGCGCTGG CACCGCTCGT TCATCTTGAA CCAACGCTCG ATCTTGCGCC CGACGGCCTC CGCCGCCTTG CCGCGCTGGG CGGGGATGCG GGCGGTCTGC GCCTCTCCAA GGTACAGGCC CGACATCTCG CCACGCTCCG GTCCGAGAGC GGCGGCAATG ATACCGCGCT GCACCTTGGC CAGCGGCTCG GGCCCGAGAC CGCGGCGGAG GTGCTGGCCT TGCGCGCCGC ATCCCTTGGC CAGCCGATCC CGCCGAATGC CCGCTCCGAC ATCGCCCGGG GGGCCGCGGC GACCTTCCCG GTGCGGGCGG CCGATCTTCC CGCCGATCTC GAAGGCCCGG CCATCGGCGC GGCCCTGGGC ATACTCGAAG CGGCCTGGCG CGCGTCGGAC TTCCGCCTCG ACCGGGAGGC CCTGCTCGCG CGCTTGTGA
|
Protein sequence | MSVLASRLSH PGAQHVLGVL TGAGHAAYFV GGTVRNALIG APVTDFDIAT AALPQQVQTL AEDAGIKVVA TGIDHGTLTL VLDKTPFEVT TFRRDVATDG RRATVAFAKD VAEDARRRDF TMNALYATAA GEVVDPLGGL PDLEARKVRF IDDPEARIRE DYLRILRFFR FTAWYGDPAK GIDAEGLTAC AALADGLQTL STERVTAELL KLLAAPDPAP AVASMGQSGI LSRVLPGAAD TALAPLVHLE PTLDLAPDGL RRLAALGGDA GGLRLSKVQA RHLATLRSES GGNDTALHLG QRLGPETAAE VLALRAASLG QPIPPNARSD IARGAAATFP VRAADLPADL EGPAIGAALG ILEAAWRASD FRLDREALLA RL
|
| |