| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3431 |
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| Symbol | senC |
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| ID | 5712489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3611501 |
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| End bp | 3612121 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269360 |
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| Product | regulatory protein SenC |
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| Protein accession | YP_001534765 |
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| Protein GI | 159045971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT ACGGTGCCAC GGCGATTGCG CTGGTCACGG CCATGATCGG CGGGACCGTT
TACATGGCGT TTTTCAACTC GCCTGATGAC CCGTTGGCGC AATGCCGCGG CGGTGTTGTC
GCGACGGGCA GCGCGTCTAT TGGGGGGCCG TTCGAGCTGG TCTCTGAAAC CGGCGAGACC
GTTACCGAAG CCGAGGTTCT GACGCGCCCA TCCCTGGTCT ATTTCGGCTA CACCTTTTGT
CCAGATGTGT GCCCGATGGA CGTGGCGCGC AACGCCGAAG CCGTCGATTT GTTGCAGGAG
CGGGGCTATG ACGTGCAACC GGTCTTCATC TCAGTCGACC CGGACCGGGA TACACCGGAG
GTTGTGGAGT GGTTCACCGA CGCCATGCAT CCCGATATGC TGGGGCTGAC CGGATCTCTG
GAGCAGGTGG CGGCAGCGTC ACGCGCCTAC AAGACCTATT ACCGCAAGCA GGAAGGCGAC
GAAGAGTACT ATCTCGTCGA CCACTCTACT TTCACGTATC TGATGCTTCC GGGCAGTGGA
TTTGCCGATT TTTTCAGGCG CGAAGACTCC CCCATGCAGA TGGCAGAACG GGTCGCCTGC
TTTCTGGAGC ACTCAACCTG A
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| Protein sequence | MKLYGATAIA LVTAMIGGTV YMAFFNSPDD PLAQCRGGVV ATGSASIGGP FELVSETGET
VTEAEVLTRP SLVYFGYTFC PDVCPMDVAR NAEAVDLLQE RGYDVQPVFI SVDPDRDTPE
VVEWFTDAMH PDMLGLTGSL EQVAAASRAY KTYYRKQEGD EEYYLVDHST FTYLMLPGSG
FADFFRREDS PMQMAERVAC FLEHST
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