| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3385 |
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| Symbol | |
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| ID | 5712443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3561914 |
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| End bp | 3564349 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641269314 |
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| Product | tetratricopeptide |
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| Protein accession | YP_001534719 |
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| Protein GI | 159045925 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTT TTGGAACGGC CCGCTTGATG TTCGGCGTGC TTGGTGTGGT TGCACTCGCT
GCGTGCGACA CGGCTGAGGA GCGCGCGGAA GGCCACTACC AAAAAGGCAT CGAACTCCTT
GAGGCTGGAG ATGTCGATCG CGCGCTTGTG GAACTGCGCA ATGTTTTCCA ACTCAACGGT
CTGCACCGCG ACGCCCGGGC GCTCTATGCG GCGACTGTTC TTGACCAGGG CAGGATCAGT
GAGGCTTTCG GGCAATACCT GAGACTGGTG GAGCAATACC CGGACGATCT GCAAGCGCGC
ATCGTTCTCG CCAACCTATC TATCGACGGA CGTCAGTGGG AAGAAGCAAC GCGTCATGTC
AACCGCGCCA GGCAAATTGC AGCGGACGAT TTCGAGGTTC AGGTCCTCGA TCTTGTCATG
CGGTATCGCG AAGCGGGCTT GAACGGCGAC GATGACACGC GCAGGACCCT GCTCACCGAG
GCGGAGGCCA AGTTGGCGCA GGCGCCAGAG AAACTCACGT TGCACAACAT TCTGATCGAC
GGTGCCATCT GGCAACAGGA TTTCGATCTT GCGCTACGGC GTGTCGATGC CGCGCTGGAA
TACAACAAGG AAGCGGAGCA GCTCTACATG TTTCGCCTCG CGGCGCTCGA ACAGCTCGGG
CGCACCGTCG AAATCGAAGA ACAGCTTCTC GAACTTGTTG CTCAGTATCC AGATGTGGAT
CGCTACAGGC GTCTCGTCTT GCAGTTCTAT CGCCAGCAGA ACGAGCCTGA AAAGGCCGAG
TCGTTCATCC GTTCCGTGGT TTCCCCGAGC GACGAAGATC CGACGGAGTA CGTGGCCTTC
GTGCGTTACC TGCGGGACAC TCGTGGCATT GAAGCGGCCC TTTCCGAGCT CGAGTTGGCG
AATGAGACAG TGCCGGATCG TCCCGTTCTT CAGGCGCTCG AAGCCTCGCT GATCTTCGAT
CTCGGGCGGC GGGATGAGGG GATCTCCAAG ATGCAGGCCA TCGTGGATGC TGCGAACGAG
TCCTCCGATA CGAATCGTTT CAAGGTTGCC TTGGCTCAGA TGCTTCTCGC GACTGGAAAC
GAGGTTGGCG CGCGTCAGCT CGTCGAGGAA ACTCTGGTGG AAGACCCGAC CAACGTGGAT
GCGATTAAGA TGCAGGCGAG CTGGCTCATC GACAGGGATG AGACCGAGCG CGCCATCAGC
TTGCTGCGGA CCGCGTTGGA CCAGACCCCT GACGATCCTC AACTGATGAC TCTGATCGCC
AACGCGCATA TGCGCAACGG GGACCGGGAA CTCGCGCGGG ATCTGCTGAG TCTGGCGGTG
GAGACCTCCA GCTATGCGCC GGAAGAGAGC TTGCGCTACG CCCGTTTGCT GGTGAGCACC
GAAGAGTTTC TGACCGCCGA AGATGTGCTC GTAAATGCCC TGCGCCGCGC GCCGTCGAAT
ACGCAACTTC TTTTGGCCTT GGCCGAGGTC TACTTGCAGT TGGAAGATTG GGCGCGCGCT
GAGCATGTCG AAACAACGTT GCGTGGCCTC GATCAACCGG GGGTGCGTGA AGCAGCCGAC
AGCATTCGTG TCGCGATCCT GAACGGTCAG CAGCGTCAGG GCGAAGCGCT CGACTTGCTG
TCGAACCTGG CGACGCAGGA TGGCGGAAAC TTCACAGCCC TGACAGCCAC GGTTCAGTCC
TTGTTGAATG CGGGCGAAGC GGAGCGCGCG CGCGCCATGG TCGATGAGGC CTTGGCGCAA
GACCCGGACA GTTTCCAGGT TCTCGTTCTC GATGCGGCGC TTAAAAATTC CGTGGGCGAC
TTCGAGGGTG CTGCGAAGTC TTATCGCGCT CTGTCTGCGC GCCAAGAGGC CGGAGAGAGG
ATCTGGTTGG AACTCGTGCG TACCTTGAAC CGTTTGCAAC GCCCTGGCGA GGCTCGCGCC
GCGCTCGCCG AAGGCTTGGA GCGTTTTCCG CAGGGCGCAA ACCTGCTCTG GGCTCAAGCC
TCGACGCTTG AACAGGCGGG CGATATAGAC GGCGCGATCG AGATCTACGA GCGTCTTTAC
GAGCAGTCCA GCGGATCCAT CGTCGTCTCT AACAACCTCG CGAGTCTGCT GTCGACACAC
CGGACGGACG AGGCGAGCAT CGAGCGCGCT TACCGGATTG CCCGTCGTCT GCGCGGCACC
GAGAACCCGG CGTTCCAGGA TACTTATGGC TGGCTTGCAT ACTTGCGCGG TGATTACGCA
GAGGCTGTCG AGTATCTCGA ACCTGCGGCC GCGGCCCTGT CGTCGGATGC GCTTGTACAG
TATCATCTCG CCATGGCTTA TCTCGCGGCA GAGCGGACAG AGGATGCCGC AGAGCAATTC
CGCAAGTCAC TGGCGCTTGT GGGGCCAGAC GAGACCCGGC CTCAGTTCGC CACCGCTCGA
GAAGAGTTGA ACAAACTCGA GACGGTTAAC CAGTGA
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| Protein sequence | MRFFGTARLM FGVLGVVALA ACDTAEERAE GHYQKGIELL EAGDVDRALV ELRNVFQLNG
LHRDARALYA ATVLDQGRIS EAFGQYLRLV EQYPDDLQAR IVLANLSIDG RQWEEATRHV
NRARQIAADD FEVQVLDLVM RYREAGLNGD DDTRRTLLTE AEAKLAQAPE KLTLHNILID
GAIWQQDFDL ALRRVDAALE YNKEAEQLYM FRLAALEQLG RTVEIEEQLL ELVAQYPDVD
RYRRLVLQFY RQQNEPEKAE SFIRSVVSPS DEDPTEYVAF VRYLRDTRGI EAALSELELA
NETVPDRPVL QALEASLIFD LGRRDEGISK MQAIVDAANE SSDTNRFKVA LAQMLLATGN
EVGARQLVEE TLVEDPTNVD AIKMQASWLI DRDETERAIS LLRTALDQTP DDPQLMTLIA
NAHMRNGDRE LARDLLSLAV ETSSYAPEES LRYARLLVST EEFLTAEDVL VNALRRAPSN
TQLLLALAEV YLQLEDWARA EHVETTLRGL DQPGVREAAD SIRVAILNGQ QRQGEALDLL
SNLATQDGGN FTALTATVQS LLNAGEAERA RAMVDEALAQ DPDSFQVLVL DAALKNSVGD
FEGAAKSYRA LSARQEAGER IWLELVRTLN RLQRPGEARA ALAEGLERFP QGANLLWAQA
STLEQAGDID GAIEIYERLY EQSSGSIVVS NNLASLLSTH RTDEASIERA YRIARRLRGT
ENPAFQDTYG WLAYLRGDYA EAVEYLEPAA AALSSDALVQ YHLAMAYLAA ERTEDAAEQF
RKSLALVGPD ETRPQFATAR EELNKLETVN Q
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