| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3382 |
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| Symbol | |
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| ID | 5712440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3556189 |
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| End bp | 3559443 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641269311 |
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| Product | protein of unknown function DUF490 |
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| Protein accession | YP_001534716 |
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| Protein GI | 159045922 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACGGT TTCTGACATA TCTGCTTTGC CTGCTGTGGC TGCCCCTCGG AGCACTGGCA
CAGGACGAAG AAAAAGGTGG GCTTGAGGGT CTGCTCGAGC GCAGCCTCTC CAGTGAGACT
TTTCAGGTCA CTGTGGACGG GCTGTCGGGT GCGCTGTCCT CGACTGCCTC CATCGAGAAA
CTGACCTTTT CCGATCCGAG CGGGCCATGG CTCGAGATTG AGAACGCGGC ACTGAACTGG
ACCCGGACGG CTCTTCTGCG CGGGCGTGTG CAGGTCGCGG AGTTGGCGGC CGAGCGCATT
CGCGTCTTGC GCCTACCCGC AGGCCCAGAA GAAGACCCCG AGTTGCCCTC CGCCGCCGCA
GAGCCCTTTA GCTTCAACTT GCCAGAACTG CCGGTTTCCA TAGAGGTAGA GCGCTTCTCG
GCTGGCGAGA TCTTTGTCGC CGCCCCGGTC ATCGGAGAAG AAGTCGTCGC GACCCTCGAG
GGTGGTTTGC GGCTGGTGGA TGGCGAAGGA TCGGTGAATC TGGACTTGCT GCGCACGGAT
GTCACAGGAA CGGCGCTCAA ACTCGACGCC AGTTTCGAGA ACGAGACCGA AGAACTGGTG
GTGGAGTTGG ACGCACAGGC GCGCGAAGGC GGTCTGATCG CGCGAAAGTC GGGCATTCCG
AACGCACCGG CGCTCGACTT GAACGTGGCG GGCCGCGGCC TTTTGTCGGA TTTCACGGCT
GACGTGAATT TCGCCACTGC GGACAGCACC CGGTTGGGCG GTGTCGTTCA ATTGCTTGCC
GCCGCAGCCG AGGACCCAAC CGACGGTGTG GACAGGCGCA TCATCGCATC CCTTTCCGGG
GATGTACGTC CCTTGGTAAT AGCGGACCTG CAAAGCTTCT TCGGCGAAGA AACGAAAATC
GATATCGAAA CGGTCTTGGC TGGGTCCGGC GCCATCGCAG TGCCCCGACT GCACTTGACG
ACGAATCAAC TCAATCTGCG CTCGACCGTT TCGCTGACCG AAGCACTTTG GCCGGAAAAG
ATCGCACTCT TCGCGCGCCT CCACGGCGAG GACGGAGAAC CGATTGCACT GCCGGTGCCC
GGAAGTCCCA CCGAACTGTC GCGTGCGTAT ATCAGTTTTT CCTATGATGA GGCGGGCGCA
TCGGTCTGGT CTGCTGTCAT AACCGCCTCG GACCTTTCGC AAGGAGATAT CTCCTTGGAT
ACCATCGACC TGCGCGGTGC AGGCCAACTG GCCCTGCCAA GCAACACCGA AGCCGGTGCT
GTATCCGGTC AGCTCAGCGG GGGCGTGGGT GGGCTCGATC TGGGCGACCC GACCTTGCAG
GGCGCTGTGC GGGACGAAGT CGCGTTCGCG ACCTCTTTTG CCTGGCGCAA GGGGGAGCCT
CTGGACATCG GTGGCGCCGA AATTGCCTTG GGCGATGTCG AGCTTAACCT CACCGGACTT
TTCGCGAACC TCGCGGCCGG CGTGGATTTC GACGGGGCGA TCAGTCTTGA TGCACCCGAC
CTGTCGCGCT TCGCACAGCT CGCCGGACAA GATCTGAACG GGGCTGTGTC GCTGGATATC
GAGGGGACGG CTACACTTCT GTCGGGCATG TTCGACCTTG CGATCCGTGG AAACGCAGAT
GAGCTGCGGA CCGGCATTGC GCAAGCGGAC GACCTGCTGG GTGGCACGGC CAGCCTGGCG
TTCGATGGCG CACGGGACGA AAACGGTATC TCCATCCGCC AAGCTTCCCT TCAGACTACG
GCAATCGGCG TTGAGGCTGA GGGCACGCTG GGCAATGCAG CTGGAGAGAT TTCGCTGACC
GCTAAACTCG ACAATCTGGC GCGACTTGTG CCGGACTTGC CAGGTCCGAC CTCATTCACC
GGCACGGTCA CCCAGAGCGG AGAAACACTG CGGGTGTCAG GCCAAGGCTC GGGGCCCGCG
GGTCTGGACC TGTCGATCGA CGGAGATGTG GCCGCGAATT TCACAACCGC TGATCTGACC
GTGGGTGGGG GCACCTCTCT GGTGATCGCA AGCCCATTCA TCGCACCAAG AACCGCCACC
GGCAGACTGG ATTTCGACCT GGCGGTTGCA GGACCCCTGG GACTGGAGGC GGTTTCAGGC
ACCGTATCCC TCCAGGACGC GCGCGTGGCC GACCCTTCCA TCGGCTTTGC CCTGGAGAAC
CTAGGCGGCT CAGCGCAGCT TGATGCCGGC ACTCTGGGCC TCGACTTTTC TGGACGCGGG
AATCGCGGTG GCAGGATCGA CCTCGGCGGC AGTCTAGGGC TAACCGGATC GCAAGTGGCG
GACCTCAGCG TTGTTCTAGA TGATCTGAGA CTGGCAATAC AGGGTTTCCT CGCAACTGAA
CTGGACGGTG AGATCGCCTT CGCAGGCCCA CTGACCGGAG GCGCGGCACT GACCGGTGTA
ATCAATGTCG ATCAGACCGA GATACGCGTA CCCGACGGGG CCGGGGCCAG CGGCGAAATC
GACGGCTTGC GACATGTACG TGCGCCCGAG CCGGTGCGCA GAACCTTGAC ACGCGCGGGG
CTTGTCACAG TGCCGAAACC ACCTTCGGGG GGCGGCGGCC CCGCGATCGG ACTGGATTTG
ACAGTAAATG CACCGTCTCA GATTTTCGTC CGTGGGTTCG GACTGGATGC GGAACTAGGT
GGGGATATCC GGGTGACGGG CACCACCGCC GACCCCCGCC CGGTCGGCGA ATTCGACCTT
GTGCGCGGAC GACTGAACAT TCTCGGCCAG CGCCTGGAAC TGACGGAAGG CAACATCCGT
CTGAGCGCAG ATCTCATCCC CGATATTCGC TTCGTGGCGA CCGTCACCAG CGACGATGTC
GAGGTGTCGG CCATCGTCGA AGGGCCTGCA GATGATCCAG AGGTGAGCTT CGAGTCCAAC
CCGCCCCTGC CCGAGGACGA AGCGCTGGCG CGCCTGCTGT TCAATGCGGA TATAAACAGC
CTGAGCCCGA TTCAGGCGCT GAGGCTGGCG AACGCCCTTA TCGCCGTGCA GAATGGTACG
GGGCTGGGTC TTTTCAATTC TCTGCGGGAG GAAGCTGGGC TCGACGACCT TGACCTTGTC
ACCGACGAGG ATGGGCAAAC CAGTCTTCGG CTCGGCAAGT ATATCTCTGA CGATGTCTAC
ACCAATGTGG ATGTGAACGC GGACGGAGAA ACCGAAATCA TTCTGAACAT CGACCTGACT
GATAGCCTGA CAGCGCGGGG AACGGCGGGC ACCGATGACA GCGCAATCGG CCTGTTTTTC
GAACGAGATT ACTGA
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| Protein sequence | MKRFLTYLLC LLWLPLGALA QDEEKGGLEG LLERSLSSET FQVTVDGLSG ALSSTASIEK
LTFSDPSGPW LEIENAALNW TRTALLRGRV QVAELAAERI RVLRLPAGPE EDPELPSAAA
EPFSFNLPEL PVSIEVERFS AGEIFVAAPV IGEEVVATLE GGLRLVDGEG SVNLDLLRTD
VTGTALKLDA SFENETEELV VELDAQAREG GLIARKSGIP NAPALDLNVA GRGLLSDFTA
DVNFATADST RLGGVVQLLA AAAEDPTDGV DRRIIASLSG DVRPLVIADL QSFFGEETKI
DIETVLAGSG AIAVPRLHLT TNQLNLRSTV SLTEALWPEK IALFARLHGE DGEPIALPVP
GSPTELSRAY ISFSYDEAGA SVWSAVITAS DLSQGDISLD TIDLRGAGQL ALPSNTEAGA
VSGQLSGGVG GLDLGDPTLQ GAVRDEVAFA TSFAWRKGEP LDIGGAEIAL GDVELNLTGL
FANLAAGVDF DGAISLDAPD LSRFAQLAGQ DLNGAVSLDI EGTATLLSGM FDLAIRGNAD
ELRTGIAQAD DLLGGTASLA FDGARDENGI SIRQASLQTT AIGVEAEGTL GNAAGEISLT
AKLDNLARLV PDLPGPTSFT GTVTQSGETL RVSGQGSGPA GLDLSIDGDV AANFTTADLT
VGGGTSLVIA SPFIAPRTAT GRLDFDLAVA GPLGLEAVSG TVSLQDARVA DPSIGFALEN
LGGSAQLDAG TLGLDFSGRG NRGGRIDLGG SLGLTGSQVA DLSVVLDDLR LAIQGFLATE
LDGEIAFAGP LTGGAALTGV INVDQTEIRV PDGAGASGEI DGLRHVRAPE PVRRTLTRAG
LVTVPKPPSG GGGPAIGLDL TVNAPSQIFV RGFGLDAELG GDIRVTGTTA DPRPVGEFDL
VRGRLNILGQ RLELTEGNIR LSADLIPDIR FVATVTSDDV EVSAIVEGPA DDPEVSFESN
PPLPEDEALA RLLFNADINS LSPIQALRLA NALIAVQNGT GLGLFNSLRE EAGLDDLDLV
TDEDGQTSLR LGKYISDDVY TNVDVNADGE TEIILNIDLT DSLTARGTAG TDDSAIGLFF
ERDY
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