Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3316 |
Symbol | serB |
ID | 5712373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3478598 |
End bp | 3479476 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641269244 |
Product | phosphoserine phosphatase |
Protein accession | YP_001534650 |
Protein GI | 159045856 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.979977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTTG CCACCCTGCT GACCGATCCT GCCGCGCCCG CGCTGGAGGA GGCGATGGTC ACCGCCCTGC GCGATGCCTG GGGCGGGGGC GATGCGCGGT GGTTGGCCGC GGGGGAGGCG GCGGAGTTTC CGCTGCAGGA GGTGCCCGGC AACCTGTGGC AGGTTTGGGC GGACTTGCAG GGCCAGCGCG TCGATCTGGT GGTGCAGCCC GCGGCGGGGC GGCGCAAGGC GATGCTGCTG GCCGATATGG ACAGCACCAT GATCCGGCAG GAGTGTATCG ACGAGTTGGC CGATGAGGCC GGGGTCGGGC CGCGCGTCGC CGAAATCACC GCGCGCGCGA TGAATGGCGA GCTGGATTTC GAGGGTGCAC TGCGGGAGCG GGTCGGGCTG CTGGCCGGGC TGGATGCGGC GGTGATCGAC CGGGTTCTGG AGACGCGGAT CGATCTGATG CCGGGGGGGC GGGCGCTGGT GGCGACGATG AAGCGGGACG GGGCCTATGC GGCGCTGGTC TCGGGCGGGT TCACGGCGTT CACAGCGCGG GTGGCGGCCC TGTTGGGGTT CGACGAGAAT CGCGCCAACA CGCTGGAGAT CGTGGACGGG GTGCTGACCG GCCGGGTGAT CGAGCCGATC CTGGGTCGGG CGGCGAAGGT CGCGGCCCTG GAGGAGATCA CCGCGCGGCT GGGGATTTCG GAGGCGGATG TGATGGCCGT GGGCGACGGC GCCAATGATC TGGGGATGCT GGGCCGGGCG GGGGCGGGCG TGGCGCTCCA CGCCAAGCCA GTGGTGGCCG CGGAATGCGA CCGGCGGATC AATTTCGGCG ATCTCAGCGC GCTGCTGTTC CTGCAGGGTT ACAGCCGGGC GGATTTCGCG ACGACCTGA
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Protein sequence | MFVATLLTDP AAPALEEAMV TALRDAWGGG DARWLAAGEA AEFPLQEVPG NLWQVWADLQ GQRVDLVVQP AAGRRKAMLL ADMDSTMIRQ ECIDELADEA GVGPRVAEIT ARAMNGELDF EGALRERVGL LAGLDAAVID RVLETRIDLM PGGRALVATM KRDGAYAALV SGGFTAFTAR VAALLGFDEN RANTLEIVDG VLTGRVIEPI LGRAAKVAAL EEITARLGIS EADVMAVGDG ANDLGMLGRA GAGVALHAKP VVAAECDRRI NFGDLSALLF LQGYSRADFA TT
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