Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3174 |
Symbol | nirH |
ID | 5712230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3337486 |
End bp | 3337971 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269101 |
Product | putative nitrite reductase heme biosynthesis H protein |
Protein accession | YP_001534508 |
Protein GI | 159045714 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.827846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGG ATCATATCGA CCGAGCGCTC ATCGCCGAAA CCCAGGCCGG GTTGCCCCTG GTGGCCGAGC CCTATGCCGC CGTGGCCGAG GCGCTCGGGA TGCCCGAGGA CCAGGTCATG GCGCGCCTGC GCAGCCTAAA GGCTCGCGGG ATCATGCGCC GGATCGCCAT CGCGCCCAAC CACTACAAGC TGGGCATGAC CGCAAATGGC ATGACCGTCT GGGACGTGCG CGATGCGGAT GTGGCCGAGC TGGGTGCCCG GATCGGCGCG CTCGGCTTTG TCTCCCATTG CTACGAGCGG CCCCGCGCGC TGCCGGACTG GCCCTACAAC CTCTTCGCGA TGGTCCATGG CGACACCAGA GACGAGGTCG AGGCCAAGCG CGCCGAGATC GCCACCCTGC TGGGAGCGGC CTGCCGGGCG TCGGACGTCC TCTATTCCAA GCGCATCCTG AAAAAGACCG GCCTGCGGCT GGCAAAGGGG AAATGA
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Protein sequence | MKMDHIDRAL IAETQAGLPL VAEPYAAVAE ALGMPEDQVM ARLRSLKARG IMRRIAIAPN HYKLGMTANG MTVWDVRDAD VAELGARIGA LGFVSHCYER PRALPDWPYN LFAMVHGDTR DEVEAKRAEI ATLLGAACRA SDVLYSKRIL KKTGLRLAKG K
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