| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3139 |
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| Symbol | |
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| ID | 5712195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3305602 |
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| End bp | 3306732 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269066 |
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| Product | cupin domain protein |
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| Protein accession | YP_001534473 |
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| Protein GI | 159045679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.557804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA TCACCCAGAC CGAAGCCGAG GCCCGCCGCG TCAAACGCAG CGACTACACC
TCCTGCACCG TCGCCTTCAT CGACTGCAAG AAGCCCGGCT CCCACCTCAA ACAGAACTAC
TCGATCATCG GCCCCGGCGT GACCTCGTCC TCCGAGCAGG TGATCAACCT GCCCGAAGCC
CACGGGTTCA ACATCGGGGC TGCCGCCATG CCCACCGGCA TCACCAACAA CCTGCACATC
CATTTCACCG CCGAGGTGTT CATGGTCTAT GACGGGGAAT ACACCTTCCG CTGGGGCTCG
AACGGCGAGC ACGAGATGGT CGGCCGCCCG GGCGACATCC TGTCGGTGCC CACCTGGATC
TTCCGCGGCT TCACCAATAC CGGCGCGGGC GAAGGCTGGA TCTTCACCAC GCTGGGCGGC
GACAACACCG GCGGCGTGAT CTTCCATCCC GACATCCTCC GCGAAGCGGC CGATTACGGG
CTCTACCTGT CGCGCAACAA CGTGCTGATC GACACCACCC GGGGCGACCC CACCCCCGGC
GAGGGCGAAA CCCTGCCGCC GATGAGCGAT GCGGAGGTCG CCAAGCTCCG CCATTACAGC
CCCGAGGAGA TGCGCGAGCG CCTCGTCAGC ACCGCCGAGC GCGACTTCCG CCCCGCCTTC
GTCGACCGGG CGCTGGACGG TTGCGGCGCC GAGATCGCTC CGGTGATCGG CCACGGCATC
AGCCAGAACC GCGACCACGC CGCCAAGATC CGCAACCCCC ACGGGTTCTC CATGGAATGG
CTCCGGGTCG CACCGGGGCA GACCGTCTCC CCCTTCACCC TCGACGACAA GATGGTGGTG
ATCCCGCGCA CGGACGGGCT GCGGGCGAGG CTCAACCCCG AGGGCGACGT GACCCTGGAC
CTCGGCGGGT GGGAGACGTT CTCGATCCCC GCCGAAATCA CCCGCGCCTT CGAGAATACC
TCCGACAGCC CGGTCGAAGC CCTGATCATC GTCTCCGGCG ACCACCAGAA ACGGCCCCGC
TTCGCGCCGC AGGTGCTCGC GGCGGCGGCG GAAAAGGACC TCGCCCTGGA TGCCCAGGGC
TACGTGGCCG CCGCCCACCT GATCCCGAGC TATGGCCTCG TGGCCGAGTA A
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| Protein sequence | MTRITQTEAE ARRVKRSDYT SCTVAFIDCK KPGSHLKQNY SIIGPGVTSS SEQVINLPEA
HGFNIGAAAM PTGITNNLHI HFTAEVFMVY DGEYTFRWGS NGEHEMVGRP GDILSVPTWI
FRGFTNTGAG EGWIFTTLGG DNTGGVIFHP DILREAADYG LYLSRNNVLI DTTRGDPTPG
EGETLPPMSD AEVAKLRHYS PEEMRERLVS TAERDFRPAF VDRALDGCGA EIAPVIGHGI
SQNRDHAAKI RNPHGFSMEW LRVAPGQTVS PFTLDDKMVV IPRTDGLRAR LNPEGDVTLD
LGGWETFSIP AEITRAFENT SDSPVEALII VSGDHQKRPR FAPQVLAAAA EKDLALDAQG
YVAAAHLIPS YGLVAE
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