| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3075 |
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| Symbol | ydiS |
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| ID | 5710927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3242821 |
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| End bp | 3244470 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269002 |
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| Product | electron transfer flavoprotein-ubiquinone oxidoreductase |
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| Protein accession | YP_001534409 |
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| Protein GI | 159045615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.816418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA TCGAGCGTGA AGCGATGGAA TACGACGTGG TGATCGTCGG AGCGGGCCCG
GCGGGCCTGT CGGCGGCGAT CCGTCTGAAA CAGCTGGACG CGGATCTGAA CGTCGTCGTG
CTGGAAAAAG GCTCAGAGGT CGGCGCGCAT ATCCTGTCCG GCGCGGTGCT GGATCCCGTC
GGTCTCGATG CGCTGATCCC CGACTGGAAG GACCGCGGCG CGCCCATCAC CGTGCCCGTG
CGCGAGGACA AGTTCTACAT GCTGGGCGAG GCGGGCGCGA TGCGCATCCC GACCTTCCCC
ATGCCGCCGC TGATGAACAA CCACGGCAAC TACATCGTCT CGATGGGTAA TGTCTGTCGC
TGGATGGCCG AGCAGGCCGA GGAAATGGGC GTCGAGATCT TCCCCGGCAT GTCCTGCTCG
GAGCTGGTTT ACGGCGAGAA CGGCGAAGTC AAAGGCGTGG TCGCCGGCGA GTTCGGCAAG
AACCCCGACG GCACGCCCGG CGACAGCTAC GAGCCGGGCA TGGAGCTACA CGGCAAATAC
GTGATGCTGG GCGAAGGCGT GCGCGGATCG CTCAGCAAGC AAGTGATCGA GAAATACGAC
CTGTCCATGG GCCGCGAGCC GCAGAAATAC GGCCTTGGCA TGAAGGAAAT CTGGGAAATC
GACCCCGAGA AGCACCGCGA AGGCAGGGTC GTGCACACCA TGGGCTGGCC TCTGGGCAAG
AACGCGGGCG GCGGGTCGTT CATCTATCAC CTGGACAACA ACCAGGTCTA TGTGGGCTTC
GTGGTGCACC TGAACTACGA AAACCCGTAC CTGTTCCCCT ACATGGAATT CCAGCGGTTC
AAGCACCACC CGATGGTGGC CGAGCTGCTC AAGGGCGGCA AGCGGGTGGC CTACGGCGCG
CGCGCGATCT CCGAGGGCGG GTACCAGTCC ATGCCCAAGG CCTGCTTTCC TGGCGGGGTG
CTGCTGGGCT GTTCCGTGGG GCTGGTGAAC GTGCCGCGGA TCAAGGGCAA CCACAACGCG
ATGTTGTCGG GCAAGGCGGC GGCGGAGGCG GCCCATGCCG CGCTGGCGGC GGGCCGGTTC
GGCGATACCC TGAAGGAATA CGAGGGCGAG TTGCGCTATG GCCCGGTGGG CCAGGACCTC
AAGAAGGTGC GCAACGTCAA GCCGCTATGG TCGAAATACG GGCTGACGGC ATCCCTGACC
CTGGGCGGGC TCGACATGTG GACCAACACG CTGGGCTTTT CACTGTTCGG GACGGTCAAG
CACGGCAAGA CCGACGCCGA GGCCACCGGC AAGGCGGCCA GGTTCACGCC CATCGACTAC
CCCAAGCCCG ATGGCGTGCT GTCCTTCGAC CGGCTGACCA ACGTGGCCTA TTCCTTCACC
AACCATGAAG AGGCGCAGCC CGCGCACCTG ACCCTGAAGG ATGCCAGCAT TCCCGTGGGC
AGGAACCTGC CCGACTACGC CGGCCCCTCG GCGCGCTATT GCCCGGCGGG GGTCTACGAG
TTCGTCCGCG AAGAGGGCAA GCCGACCCGG TTCGTCATCA ACTTCCAGAA CTGCGTCCAC
TGCAAGACCT GCGATATCAA GGACCCCGCC CAGAACATCG TCTGGACCAC CCCCCAGGGC
GGAGACGGCC CGAACTACCC GAACATGTGA
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| Protein sequence | MTQIEREAME YDVVIVGAGP AGLSAAIRLK QLDADLNVVV LEKGSEVGAH ILSGAVLDPV
GLDALIPDWK DRGAPITVPV REDKFYMLGE AGAMRIPTFP MPPLMNNHGN YIVSMGNVCR
WMAEQAEEMG VEIFPGMSCS ELVYGENGEV KGVVAGEFGK NPDGTPGDSY EPGMELHGKY
VMLGEGVRGS LSKQVIEKYD LSMGREPQKY GLGMKEIWEI DPEKHREGRV VHTMGWPLGK
NAGGGSFIYH LDNNQVYVGF VVHLNYENPY LFPYMEFQRF KHHPMVAELL KGGKRVAYGA
RAISEGGYQS MPKACFPGGV LLGCSVGLVN VPRIKGNHNA MLSGKAAAEA AHAALAAGRF
GDTLKEYEGE LRYGPVGQDL KKVRNVKPLW SKYGLTASLT LGGLDMWTNT LGFSLFGTVK
HGKTDAEATG KAARFTPIDY PKPDGVLSFD RLTNVAYSFT NHEEAQPAHL TLKDASIPVG
RNLPDYAGPS ARYCPAGVYE FVREEGKPTR FVINFQNCVH CKTCDIKDPA QNIVWTTPQG
GDGPNYPNM
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