| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3015 |
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| Symbol | |
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| ID | 5710867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3183841 |
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| End bp | 3184692 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268942 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001534349 |
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| Protein GI | 159045555 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.103584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.15969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGA TCCTGCGCCA TCGCGATTAC CTGTCGCCGC CCGTGGCATG CCATTTCGCG
CGCGTGACAC TGGAGGACGG ACCGATGCCC GCCCCCCATG GCCAGGATTT CCATGAGCTG
TTCCTTGTCA CCGGCGGCAC GGTCCGACAT CGCATCAACG GGACGCGGGA GGCGCTGCCC
GCGCGGTCCC TGTGCTTCGT GCGTCCAAAA GATCGCCACG GGCTCGGCGG CCCGGCCAGT
CTGATCAACC TGCTGGTGGC CCCCGACAGC CTCGCCCACC TGGTCGCGCG CTACCCGGAA
CTGGATGGGC GCACGTTCTG GAGCGATGCG GCGCGCCCCG TGACCCTTGC CCTCGACGCC
GAGCAGGCGG GGATGTTGGC CCGGGCGCTG GCGCGCCTGG AGGAAGGGCT GCGCAGCCGT
TTGGCGGTGG AGGCGCTGCT GCTGGAGTTG CACACGCGCA TCCTCCGCCC GTTGCCCGCC
CTGCCCGGGG GCCTGCCCGG CTGGCTGACC CGAACGCTGC GCGCTGCCGA GGACCCCGCC
GTTTTCACCC GCGGACCAAG GGCGCTGGCG GATGTCGCGG GCAAGTCGCC TGCTTATCTC
GCCCGGGCAT TCCGCACGCA TCTGGGCGCC AGCCCGACCG AATGGATCAA TGCCCGCCGA
ATGGCCCATG CATCGCGCCT TATGACCAGC ACTGATATGA GCCTGACGCG GATCGCGGAG
GCCTGCGGAA TCGAGACGCC AAGCCATTTC CAGGCGCTCT TCAAGGCCCA TTACGGCACG
TCGCCCGCGC GCTGGCGCCG GGCCCATCGC CACGAGGTGG TCCAGCCCGC CCGCCCGGCC
CCGCGCGGGT GA
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| Protein sequence | MPLILRHRDY LSPPVACHFA RVTLEDGPMP APHGQDFHEL FLVTGGTVRH RINGTREALP
ARSLCFVRPK DRHGLGGPAS LINLLVAPDS LAHLVARYPE LDGRTFWSDA ARPVTLALDA
EQAGMLARAL ARLEEGLRSR LAVEALLLEL HTRILRPLPA LPGGLPGWLT RTLRAAEDPA
VFTRGPRALA DVAGKSPAYL ARAFRTHLGA SPTEWINARR MAHASRLMTS TDMSLTRIAE
ACGIETPSHF QALFKAHYGT SPARWRRAHR HEVVQPARPA PRG
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