| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3014 |
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| Symbol | |
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| ID | 5710866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3182924 |
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| End bp | 3183751 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268941 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_001534348 |
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| Protein GI | 159045554 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.347351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0815501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA CGCCCCCCGA CCTGTCCTTT GCCCCTGTCC GTACCCCGGC CCCGGCGACC
CTGAACGCGG CCCAGATCGA CCACTACAAC CGCGAGGGCT ACCTCACCGG TCTGCGCGCC
TTCCCGCCCA GCGTCGCGGA GGCGAATCGC GTGATCTTCG ACGGGCTTCT GGCGGGGCTC
GGGCGCGAGG GCGCCTATGC GATCAACTGC TACCAGGCCC GTGCCCAGGC GATCTGGGAC
CTCTGCACGG CCCCCGCGAT CCTTGATGTG GTCGAGGACC TGGTGGGGCC CAACGTGATC
TGCTGGGCGT CGCATTTCTT TTGCAAGCTG CCGGGCGATC CGAAACACGT CCCCTGGCAT
CAGGACGCCG CCTTCTGGCA TCTGGCGCCC GCGCGCACGG TCACGGTGTG GCTGGCCATC
GACGATGCGG ATGCCGAGAA CGCGGCGATG CAATTCATTC CCCGCAGCCA CGACAAGGGC
GCGCTGGACT GGCGGGCGTC CGAGGGCGGG GTACTGAACA AGGAACTGGT GGATGCCGAG
AGGCTGGGCG CACCGGTCAC GAACGCCCTG CGCGCTGGCG AGATGTCGGT TCACGCGGAC
ATGCTGGCCC ATGGTTCGGC CGCGAACCTG AGCGACCGGC GCCGCTGCGG TCTGACGATC
CGCTACTGTC CGCCGGAGGT GCGCATCACC GACCCGGTCT GGGCACGGGG GATCGAGGCG
ATCCTCTGCC GCGGCACGGA TCCGACGGGC CATTGGCGCC ACCATGCGCG GCCCCGGGGC
AACGATGTCT CGCCGGAAAA CAGCCCCCGC AACCTGGGCG GCAACTGA
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| Protein sequence | MLDTPPDLSF APVRTPAPAT LNAAQIDHYN REGYLTGLRA FPPSVAEANR VIFDGLLAGL
GREGAYAINC YQARAQAIWD LCTAPAILDV VEDLVGPNVI CWASHFFCKL PGDPKHVPWH
QDAAFWHLAP ARTVTVWLAI DDADAENAAM QFIPRSHDKG ALDWRASEGG VLNKELVDAE
RLGAPVTNAL RAGEMSVHAD MLAHGSAANL SDRRRCGLTI RYCPPEVRIT DPVWARGIEA
ILCRGTDPTG HWRHHARPRG NDVSPENSPR NLGGN
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