| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2998 |
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| Symbol | |
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| ID | 5710850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3162333 |
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| End bp | 3164813 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268925 |
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| Product | putative mechanosensitive ion channel |
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| Protein accession | YP_001534332 |
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| Protein GI | 159045538 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCC CCTCTGCCCC GATGGCGCTC TGCGCCGCAC GATTTGTTTT CTTGCGCGGC
TTCCTTGTCG CGGTTGCGAC CCTGCTGGCC CTGGTGCTGG GAAGCTGGAC CGCCAGCGCC
CAGTCGACCT TCCCCATCCC GGGGATGACC GGCAACAGCA GCACCGAGGC CCCCGCCGAG
GACGCCCCTG CCGAGGCCAC CACCCCGGCG GACCCGACCC AGGCCCTGAT CGAGCTTTTG
CAGGACGAGG CGGCACGCGC CGCATTGATC GCACAGCTGG AACAGGCCGC CGCCGGCACC
GCGGCCGCGC CCGAGGGAAG CGCCACCGCT CCGGCCGCCG CCGCGCCCGA GGCCACAACC
ACAACCACGA GCACCGTCGG CAATTTCTCG ACCCGCCTGA TCCAGGACCT GCGCACCACC
ATGGCGGACA ACCTGCGCGG CTTCATGGCG CGGGTGGAAC GCATCCCAAC GACCCTCGGC
CTCGCGATCC GGGGGCTGAA TTCGGATCTG TTGCTGACCA TCGTGCGAGA TCTGGTCGAG
GCCGTGCTGG TCACCTACGG CGCGCTGATA CTGCTGCGGC TTGCGATGCG CCCCTTGCTG
CGCATGATCG GGCGCAAGGC AGTCAGTACC AACTGGTTGT ATCGCTTCAT CCTGAGGATC
ATCGGCACGG GCTTGCTGGC CCTGGCCATC CCCATCGCGC TGGTGATCGG CGTGGCGGTC
GTCAGCGTTT CGGTCGTTGC CGAGAACGGC GCTTCCCTGA ACACCGCGCA GGCTGCCTTC
TTCGCCGCCT TCGCGCTGGT CGAGATGCTG AAGCTGCCAT CGCGCTTCGT TTTGACCCCC
CGGACCGACC AACTGCGCTT CATCGATGTG AGCGACAAGG CCGCCCGGCA GATCCAGCGG
CTGATCGCCT TCGCCATCGG TTTGGCGGCC TACGGGCAAC TCGTCGCCGT GCCGGTGGTG
ACCGAGCAGA CCTCGGTCTT CATCGGGCGG GCGGTGGCGA CCCTGCTGGG GGCGATCGTG
ATCGTCTACC TCGTAGGCGT CGTTCTGGCC TATCGCAAGA AGGTGGGCGC CTGGCTGACG
CGCTACAGCA AGGAGGACGT CACCCTTGAC GAGGTGCTGT CCTATTTCGC GCTGCGCTGG
CACTGGCCGG TGCTGGCCTA CCTGGTCTAC GTCCTCGTGG TGGTGCTGAC GCGGCCGGGT
AACGTGCTGG GTCCGCTCGC GGCGGACACG GTGCGGGTGG TGCTGATCCT CGGGATCGGC
GGCACGGTCA CCATGCTGGC GCGCCGCGCC ACCCAGCGCC GGGTGCGGCT GCCGGAGATG
GTCGATAGCC GACTGCCCCT GCTGGCGAGC CGGTTGAACC GGCTGCTTCC TGCGGGGCTG
GTCGTGGTAC GGATCGCGGT TGTGATCCTG GTGGTGCTGT CGATCCTGGA CGTGGTCGAG
TTGTTCGATT TCTCGGGATA TCTGGGCTCG GACGCGGGCG GTGCCATGGT GGGCGCGATC
TTCGGCGTGG CGCTGGGGCT GGTGTTCGTC GCGGTCGTCT ACCTGGCCGT GTCGTCCTGG
GTCGACTACC AGCTCAACCC GTTCGTCGGG AAACCGCCCA CCCCGCGGAC AGTCACGCTG
CTGACGCTGC TGCGCAACGC GGTGACCATT GCGCTGGTGA TCTTCGGCGG GATGTTCGCC
CTGTCGCAAT TGGGGCTGAA CATCGGGCCG CTGCTCGCCT CGGCCGGGGT TCTGGGGCTG
GCGATTTCCT TCGGTGCGCA GAAGCTGGTG GAGGACATCA TCACCGGCAT CTTCATCCAG
TTCGAGAATG CCATGAACGT GGGCGACGTG GTGGATGTGG GCGGCGTCGT GGGCACGGTG
GAGAAACTGA CCGTGCGATC GGTCACCCTG CGCGATCTGC AGGGCGTGGT TCACATGATC
CCGTTCTCCT CGGCTTCGAT GATCTCGAAC TACATGCGGG AATTCTCGTA CTATGTCTGC
GACATGGGCG TTGCGTATCG CGAGGATATC GAGATGGCGA AACAGGCCAT GTTCGACGCC
TTCGAGGAGT TGCGCGCGGA TCCCGACCAG GGCGGCTTCC TGATCGACGA TCTGGAGTGG
TTCGGGCTGA ATTCCTTCGG CGACAGCGCG ATCGTGCTGC GAGCGCGGAT CAAGACCCAG
CCGGGCAAGC AATGGGGCGT GGGCCGGGCC TATAACCTGC TGCTGAAGAA GATCTTCGAC
GATCGCGGCA TCGAGATCCC GTTCCCGCAC CAGACGATCT ATTTCGGCGA GGACCGCAAG
GGCAAGGCGC CGCCGATCCA TGTGATGATG CAGACCGGCG ATGCCGCGGC GTCCCAGGCG
CATCCGGTGA CCGAGGCGAT CCCGGACGCG CGCGGCCCCG AGCAGCTGGA GATGGACGAG
ACGCGGCGCA GGCAGGTGCC CCCGGACCGC GGCGACGAGA CCATCCCCGG CCAGGAGGAC
GACGACGGGG CGGGCCGCTA G
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| Protein sequence | MHTPSAPMAL CAARFVFLRG FLVAVATLLA LVLGSWTASA QSTFPIPGMT GNSSTEAPAE
DAPAEATTPA DPTQALIELL QDEAARAALI AQLEQAAAGT AAAPEGSATA PAAAAPEATT
TTTSTVGNFS TRLIQDLRTT MADNLRGFMA RVERIPTTLG LAIRGLNSDL LLTIVRDLVE
AVLVTYGALI LLRLAMRPLL RMIGRKAVST NWLYRFILRI IGTGLLALAI PIALVIGVAV
VSVSVVAENG ASLNTAQAAF FAAFALVEML KLPSRFVLTP RTDQLRFIDV SDKAARQIQR
LIAFAIGLAA YGQLVAVPVV TEQTSVFIGR AVATLLGAIV IVYLVGVVLA YRKKVGAWLT
RYSKEDVTLD EVLSYFALRW HWPVLAYLVY VLVVVLTRPG NVLGPLAADT VRVVLILGIG
GTVTMLARRA TQRRVRLPEM VDSRLPLLAS RLNRLLPAGL VVVRIAVVIL VVLSILDVVE
LFDFSGYLGS DAGGAMVGAI FGVALGLVFV AVVYLAVSSW VDYQLNPFVG KPPTPRTVTL
LTLLRNAVTI ALVIFGGMFA LSQLGLNIGP LLASAGVLGL AISFGAQKLV EDIITGIFIQ
FENAMNVGDV VDVGGVVGTV EKLTVRSVTL RDLQGVVHMI PFSSASMISN YMREFSYYVC
DMGVAYREDI EMAKQAMFDA FEELRADPDQ GGFLIDDLEW FGLNSFGDSA IVLRARIKTQ
PGKQWGVGRA YNLLLKKIFD DRGIEIPFPH QTIYFGEDRK GKAPPIHVMM QTGDAAASQA
HPVTEAIPDA RGPEQLEMDE TRRRQVPPDR GDETIPGQED DDGAGR
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