Gene Dshi_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2792 
Symbol 
ID5713692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2950980 
End bp2952173 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content67% 
IMG OID641268718 
Producthypothetical protein 
Protein accessionYP_001534126 
Protein GI159045332 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3853] Uncharacterized protein involved in tellurite resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.175599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.656864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA CCATTCGCGC CAAGGCCGAG GCCGCGCTCG CCGATGTCGA GGAAGTGACC 
GCCGCGGTCC TGCCGGAGCC GTCCACGGCG CTGGTGCCGC TGGCCGAGGC CGAGGCGCCC
CTCGCCGCCG ATATTCGCCG CGCGATGGAC GAGATCGACA TGGGCGACAC CCAGTCGATC
GTGCAGTTCG GCTCGGCGGC CCAGGCGGAG TTGCAGCAGA TCAGCCAGTC GATGCTGGCC
GGGGTGCGCA ACAAGGATGT GGGCCCGGCG GGCGACAGCC TGCGCAACAT CGTCACCACG
ATCCGGGGGT TTTCCATTTC CGAGCTGGAT GTGCGGCGCG AGCGCAGCTG GTGGGAGAAG
CTGACCGGCA AGGCCGCGCC CATGGCGAAG TTCGCGGCGC GCTACGAAGA GGTGCAGGGC
CAGATCGACC GGATCACCGA CGAGCTGCTG GCCCATGAGC ACACGCTGCT CAAGGACATC
AAGTCGCTCG ACAAGCTCTA TGAGAAGACG CTGGAGTTCT ACGACGAGCT GGCGGTGTAT
ATCACCGCGG GCGAGGAGAA GATCGCCGAG CTGGACGCCA CCACCATTCC CGCCAAACAG
GCGGAGGTCG AAGCCGCGCC CGAGGACGAC CAGGTGATGC GCGCCCAGGA GCTGCGCGAT
CTGCGCGCGG CAAGGGACGA CCTGGAGCGG CGGGTGCATG ACCTGAAGCT GACGCGGCAG
GTCACGATGC AATCGCTGCC GTCGATCCGG CTGGTCCAGG AGAACGACAA GTCGCTGGTC
ACCAAGATCA ACTCGACGCT CGTGAACACC GTGCCCCTGT GGGAGACCCA GCTGGCCCAG
GCGGTGACGA TCCAGCGGTC GCGCGAGGCC GCAGAGGCCG TGCGCGGGGC CAATGACCTG
ACCAACGAGC TGTTGACGGC GAATGCCGAG AACCTGCGCC AGGCCAACAA GGTGGTGCGC
GAGGAGATGG AGCGCGGGGT GTTCGACATC GAGGCCGTGA AGCAGGCCAA CGCCACCCTG
ATCGGGACCA TCGAGGACAG CCTGAAGATC GCCGACGAGG GCAAGGCCCG CAGGGCTGCC
GCCGAGGAGG AGCTGCAGAA GATGGAAGCC GAGCTGCGCG ACACGCTGGC CTCGGCCAAG
TCCCGCGGCG ACAAGACGGG CTACAACGCC GGGAGCGCCG TGCCCAAGGC ATGA
 
Protein sequence
MSDTIRAKAE AALADVEEVT AAVLPEPSTA LVPLAEAEAP LAADIRRAMD EIDMGDTQSI 
VQFGSAAQAE LQQISQSMLA GVRNKDVGPA GDSLRNIVTT IRGFSISELD VRRERSWWEK
LTGKAAPMAK FAARYEEVQG QIDRITDELL AHEHTLLKDI KSLDKLYEKT LEFYDELAVY
ITAGEEKIAE LDATTIPAKQ AEVEAAPEDD QVMRAQELRD LRAARDDLER RVHDLKLTRQ
VTMQSLPSIR LVQENDKSLV TKINSTLVNT VPLWETQLAQ AVTIQRSREA AEAVRGANDL
TNELLTANAE NLRQANKVVR EEMERGVFDI EAVKQANATL IGTIEDSLKI ADEGKARRAA
AEEELQKMEA ELRDTLASAK SRGDKTGYNA GSAVPKA