| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2738 |
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| Symbol | rpiA |
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| ID | 5713637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2899846 |
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| End bp | 2900628 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268663 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_001534072 |
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| Protein GI | 159045278 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.46075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.02596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGGAG AAATGTCGCC CATCGACCGC GCCAAGTACG TCGCCGCGAA GCGCGCGGTG
GGCTTTGTCG AGGACGGGAT GCGGGTCGGG CTCGGGACCG GGTCCACGGC GGCCTGGATG
GTGCGCCACC TGGCCGAGAC CGTCGACCAG GAGGGAATGG ACATCACCTG CGTGGCCACC
TCCACCCGCA CGGCGGAGCT GGCGCGGGAT CTCAAGCTGC ACGTCACGAC GCTGGACGAG
GTGAAGTGGC TCGATCTGAC CATCGACGGG GCGGATGAGT TTGACCCGAC CCTGAACCTG
ATCAAGGGCG GTGGCGGGGC GCTCTTGCAG GAAAAGATCG TCGCAACGGC ATCCGATCGC
ATGATCGTGA TCACGGATGC GTCCAAGGCG GTCGCTACGC TTGGGGCCTT CCCGCTGCCG
GTGGAGGTGA TTCGCTTCGG CTGGGAAACG ACGCGGACAT TGATCGAGGA AACCCTCGTC
AACGTGGATG TGGGTGGGCG CGAGGCTATC CTGCGGATGG AAAACGGCAT GCCTTACGTC
ACCGACGAGG GCAATTTCAT CGTCGATCTG CACCTGGAGC GGATCGGCAA CCCCCGGCAA
GTCTCGCTGG TGCTCAACCA GTTGCCAGGG GTGGTGGAGA ACGGGCTTTT CCTCGACATC
TGTGACGTGG TGGTCATCGG CAAGAGCGAC GGGTCGGTGG AACTGCGCGA TATCAACGAG
GGCTCGGTGC ACCAAGAGCA GGTTGAAGTC ACCGCGACCG GCAACGTATT CTCCGACCTG
TAA
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| Protein sequence | MSGEMSPIDR AKYVAAKRAV GFVEDGMRVG LGTGSTAAWM VRHLAETVDQ EGMDITCVAT
STRTAELARD LKLHVTTLDE VKWLDLTIDG ADEFDPTLNL IKGGGGALLQ EKIVATASDR
MIVITDASKA VATLGAFPLP VEVIRFGWET TRTLIEETLV NVDVGGREAI LRMENGMPYV
TDEGNFIVDL HLERIGNPRQ VSLVLNQLPG VVENGLFLDI CDVVVIGKSD GSVELRDINE
GSVHQEQVEV TATGNVFSDL
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