| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2719 |
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| Symbol | cobT1 |
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| ID | 5713618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2879516 |
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| End bp | 2881390 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268644 |
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| Product | aerobic cobaltochelatase subunit cobT |
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| Protein accession | YP_001534053 |
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| Protein GI | 159045259 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC CCGACAACCC CGTCGAACCC TTCAAGAAGG CCCTGGCCGA AGCGACCCGC
GTGCTGGCCG ATGATCCGGA CATGGCGGTG ACCTATTCCG TCGATCCGCC GGGGATGACA
TCGGACTCCA TGCGCCTGCC CCAGATCAGC CGCCGCATGA CCCGCGAAGA GGTGATGTTC
GCGCGCGGCA CCGCCGATGC CTATGCCATG CGCCGGAAGT ATCACGACGC GGGCACGCAT
GCGCGATACG AACCCGCCGG GCAGATGGCG CGCGACCTCT ACGAGGCGAT GGAGACCGCC
CGGTGCGAGG CGATGGGCGC ACGGGTGATG CCGGGGACGG CTGGCAATAT CGACGCCAAG
ATCGGTGCCG AGGCCCAGCG CAAGGGCTAT GACCAGGTCA CCCAGGCCTC CGAAGCGCCG
CTGGCCATTG CCGCGGGCTA CCTGATCCGG CACCTGGCCA CGGGGCGCGA TCTGCCCAAG
GGGGCGCAGA ATGTCATGGA CCTATGGCGC GATCACATCG AGGACCAGTG CGGCGAGACG
CTTGCAACGC TGCAGCGGGA CCTGAGCGAT CAGGCCGCCT TTGCCAAGCT GGCCCGGCAG
ATCATCGACG ATCTGGGCTA TGGCGACCAG CTGGGCGACG ACCCGGACCA GGAAGAGGAC
GAGTCCGAAG ACACCTCCGA ACAGGAGGAG GATGAGGACA GCGCCGCCGA GGACGGCGAT
GAGGACGACC AGCAGTCCGA ACAGGGCGAA GCCGCCCCCG ACCCCTCCGA CACCCAGGAA
ATGGACCCGT CCCAGGCCGA GGTCGCCATG GACGACCTGG CGGATATGGA GCTGGGCGAC
GAGGCCGAGC TGCCCGAGGG CGAGGCCCCG CTTGAGCCGC CGCCGCCGCC CGCCCATTCC
GATGCGGACC CGAACTACGT GGTCTACCTC ACCGAGCACG ACGAGGAGAT CAAGGCCGAG
GATCTGGCCG AGCCTGCAGA GCTCGAACGC CTGCGCGCCT ATCTCGACCA GCAGCTCGAG
CCGCTGAAGG GCGCGGTCTC GCGGCTGGCC AACAAGCTGC AGCGGCGTCT CCAGGCGCAG
CAGAACCGCA GCTGGAAATT CGACATGGAG GAAGGCATCC TCGATGTCGG GCGGCTGGCG
CGCGTGGTCG CGAACCCGAC GACCCCGCTG AGCTTCAAGG TCGAACAGGA CACCGAGTTT
CGCGATACGG TGGTCACGCT CCTGCTGGAC AATTCCGGCT CCATGCGCGG GCGCCCGATC
TCGATTGCGG CGATCTGCGC CGATGTGCTG GCGCGGACGC TGGAGCGGTG CCAGGTGAAG
GTCGAGATCC TGGGCTTCAC CACCCGCGCC TGGAAAGGCG GGCTGAGCCG CGAGAAATGG
CTCGCCGATG GTCGCCCGCA GCAGCCCGGA CGCCTGAACG ATTTGCGCCA CATCATCTAC
AAGCAGGCCG ACGCGCCCAT GCGCCGGACC CGGAACAACC TCGGCCTGAT GATGAAGGAA
GGGCTGCTTA AGGAAAACAT CGATGGCGAG GCGCTGGAAT GGGCGCACCG CCGCATGCTG
GCACGGCCCG AGGCGCGCAA GATCCTGATG GTGATCTCGG ACGGCGCCCC GGTGGACGAT
TCGACCCTGT CGGTGAACCC GGCGAACTAT CTCGAAAAGC ACCTGCGCGA CGTGATCGCC
ATGGTCGAGA AGCGCCGCGC GGTGGAATTG ATCGCCATCG GCATCGGCCA TGACGTCACA
CGCTACTACG ACCGTGCCGT GACCATCACG GATGTGGAGC AGCTGGCAGG CGCGATGACC
GAGCAACTTG CCGCCCTGTT CGACAGCGAC CCCCGGGCCC GGGCCCGGGT GATGGGAATC
AAGCGCGCCA GCTGA
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| Protein sequence | MSKPDNPVEP FKKALAEATR VLADDPDMAV TYSVDPPGMT SDSMRLPQIS RRMTREEVMF
ARGTADAYAM RRKYHDAGTH ARYEPAGQMA RDLYEAMETA RCEAMGARVM PGTAGNIDAK
IGAEAQRKGY DQVTQASEAP LAIAAGYLIR HLATGRDLPK GAQNVMDLWR DHIEDQCGET
LATLQRDLSD QAAFAKLARQ IIDDLGYGDQ LGDDPDQEED ESEDTSEQEE DEDSAAEDGD
EDDQQSEQGE AAPDPSDTQE MDPSQAEVAM DDLADMELGD EAELPEGEAP LEPPPPPAHS
DADPNYVVYL TEHDEEIKAE DLAEPAELER LRAYLDQQLE PLKGAVSRLA NKLQRRLQAQ
QNRSWKFDME EGILDVGRLA RVVANPTTPL SFKVEQDTEF RDTVVTLLLD NSGSMRGRPI
SIAAICADVL ARTLERCQVK VEILGFTTRA WKGGLSREKW LADGRPQQPG RLNDLRHIIY
KQADAPMRRT RNNLGLMMKE GLLKENIDGE ALEWAHRRML ARPEARKILM VISDGAPVDD
STLSVNPANY LEKHLRDVIA MVEKRRAVEL IAIGIGHDVT RYYDRAVTIT DVEQLAGAMT
EQLAALFDSD PRARARVMGI KRAS
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