Gene Dshi_2635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2635 
Symbol 
ID5713533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2791005 
End bp2791742 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID641268559 
Producthypothetical protein 
Protein accessionYP_001533969 
Protein GI159045175 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.224677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.134206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCC CGGTGGTTTT CGGCTCCAAG GTGCGCGCTG TCGGGTGCAT CAGCAACCGA 
TGCCAAAGTC GGATGGCGCC GCACCACGAT CGCGCGATGA TCGACACAGC GGACAAGATC
GGGGGAGACC GAGAGATGAA AGCAACGGCT TTGGGGGTCG CGCTAGCCTG CCTCGCGCTC
CCCGCGACGG GGGCGGACCG CGATTCGGTG AACGCCCTTC TTGCGGACAA TCAGTGCCGG
GACTGCGACC TGGCGGGAGC CGAGCTGGCC GGGGCGGATC TGCGGGACGC GTATCTGACC
TATGCGGTGT TCGATGGCGC CAATCTGGAA GGGGCGGATC TGCGCGATGC GTTCATGCCG
TTTGCGCAGT TTTCCGGCGC GCGGATGCGC GGGATCCTGT TCGACCGCAC GAATGCACGC
GACACCGTGT TCGCGGGGGC GGACCTGCGC GCGGCGTCGA TGGTGGGGGT GGCCTTGCCG
AGGGCAACGC TGACCGAGGC GGATCTCGGC GGAGCGGATT TGAGCGGGGC GTTTCTGGAG
GGGGCGAATT TCGGCAATGC CCGGCTGGTG GGCGCCGTAC TGCGCGAGGC TGACCTGACC
GGTGCGAGGC TGACCGGGGC CGACCTGTCG GAGGCGGACC TGACAGGCGC GGTCACGCAG
GCGGCGGGGT TCTCGGGGGC TGTCTTCTGC CGCACGGTGA TGCCCGACGG CACGCTGCGC
AGCGACGGCT GTCCCTAG
 
Protein sequence
MNLPVVFGSK VRAVGCISNR CQSRMAPHHD RAMIDTADKI GGDREMKATA LGVALACLAL 
PATGADRDSV NALLADNQCR DCDLAGAELA GADLRDAYLT YAVFDGANLE GADLRDAFMP
FAQFSGARMR GILFDRTNAR DTVFAGADLR AASMVGVALP RATLTEADLG GADLSGAFLE
GANFGNARLV GAVLREADLT GARLTGADLS EADLTGAVTQ AAGFSGAVFC RTVMPDGTLR
SDGCP