| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2617 |
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| Symbol | |
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| ID | 5713515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2778606 |
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| End bp | 2779247 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268541 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533951 |
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| Protein GI | 159045157 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0815207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00770419 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATTTC TTGCGACTGC CGCTCTCGGC GCGGTTCTGG CCACCTCCGG CGCTCAGGCC
GCCGTCATCG ATTTCGAAGG TTTCAACGCC GGCGATATCC TGTCGGGCCT TGGTGGTCTG
TCCGTCGATG GCGTGGGCTA CAGCATCACC GTAGACAGCA ATGGCAGCAA CGATATCGCC
ATGGTGTTCG ACACCGACAA TCCGACCGGG GGGGACTCCG ACCTGGCCGC ACCGTTCACC
AATCCGGCGA CCGGGGCGCA GTTGTCGCCG GGCAATGTGC TTATCATCTC CGAGGATGGC
GACACCTCCG ACCCCGATGA TGAGCGCGCG GGCGGCAAGA TCACCTTCGC TTTCGACTCG
GCGGTGAACC TGCTTGGCTT CGATGCGTTG GATGATGTCA CCCTGACGGT CACCGACAGC
GCGGGAGGCA CGGTCACGGT CAGCGTGGCC AAGGACAACC AGTTCGCCAG TGTCACCACC
AGCTTCTTCA ACATCTCGTC GGTCCAGTTC GACTTCGGTA ACCAGTCGGG TGCTATTGAT
AACCTGAGCA TCTCGGCCGT GCCGCTTCCG GCGTCTGCCT TGCTGCTCTT CGCCGGCCTG
GGGGGGCTGG GCGTGATGTC ACGCCGTCGC AAGTCGGCCT GA
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| Protein sequence | MRFLATAALG AVLATSGAQA AVIDFEGFNA GDILSGLGGL SVDGVGYSIT VDSNGSNDIA
MVFDTDNPTG GDSDLAAPFT NPATGAQLSP GNVLIISEDG DTSDPDDERA GGKITFAFDS
AVNLLGFDAL DDVTLTVTDS AGGTVTVSVA KDNQFASVTT SFFNISSVQF DFGNQSGAID
NLSISAVPLP ASALLLFAGL GGLGVMSRRR KSA
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