| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2365 |
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| Symbol | ureC |
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| ID | 5714020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2498640 |
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| End bp | 2500349 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268289 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001533702 |
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| Protein GI | 159044908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.464458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA CGATCTCCCG CGCCGCCTAT GCCGACATGT ATGGGCCGAC CACGGGCGAC
AAGGTGCGGC TTGCCGATAC CGACCTGATC ATCGAAGTCG AGCGCGACCT CACCACCTAT
GGCGAAGAGG TCAAGTTCGG CGGCGGCAAG GTCATCCGCG ACGGCATGGG GCAGTCCCAG
GCCACCCGCG CAGAAGGCGC GGTGGATACC GTCATCACCA ACGCGCTGAT CGTGGACCAT
ACGGGGATCT ACAAGGCCGA TGTGGGCCTG CGCGACGGGG TGATCGCGGC CATTGGCAAG
GCGGGCAATC CCGACACGCA AACAGGGGTG GATATCATCA TCGGCCCCGG CACCGAGGCG
ATCGCGGGCG AGGGGCGGAT CCTGACCGCG GGCGGTTTCG ACAGCCATAT CCATTTCATC
TGCCCCCAGC AGATCGAGGA TGCCCTGCAT TCTGGCATCA CCACCATGAT CGGTGGCGGC
ACGGGCCCGG CCCATGGCTC GCTCGCCACG ACCTGCACGC CCGGCGCGTT TCATATCGGG
CGCATGCTGC AATCCCTCGA TGCGTTTCCG ATGAATTTCG GGCTGGCGGG GAAGGGCAAT
GCATCTCGCC CCGGCGCGCT GGTCGAGATG ATCGAGGCCG GGGCCTGCGC CATGAAGCTG
CACGAGGACT GGGGGACGAC CCCCGGCGCC ATCGATTGCT GTCTCAGCGT CGCCGACGAC
ATGGACGTGC AGGTGATGAT CCACACCGAC ACCCTCAACG AGAGCGGCTT TGTCGAGAAC
ACCATCGCCG CCATGAAGGG CCGCACGATC CACGCCTTCC ACACCGAAGG CGCGGGGGGC
GGCCATGCGC CGGACATCAT GAAGGTCGTG GGCTTCGAGC ATGTGTTGCC CTCCTCGACC
AATCCGACCA TGCCCTACAC GGTCAACACC CTCGAAGAGC ATCTCGACAT GCTCATGGTC
TGCCACCATC TCGACAAGGC AATTCCCGAG GACGTGGCCT TCGCCGAGAG CCGCATTCGC
AAGGAAACCA TCGCTGCCGA GGACATCCTG CACGACATGG GCGCGTTCTC GATCATCGCA
TCGGACAGCC AGGCCATGGG CCGTGTGGGC GAGGTCATCA TCCGCACCTG GCAGACCGCC
GACAAGATGA AGAAGCAGCG CGGGCGCCTT GCGGAGGAGA CGGGCGACAA TGACAATTTC
CGCGTCCGCC GCTACATCGC GAAATACACG ATCAACCCGG CCATCGCCCA CGGTATCAGC
GCCCATATCG GGTCCATCGA GGTCGGCAAG CGCGCCGATC TCTGCCTCTG GAATCCGGCC
TTCTTTGGCG TGAAGCCCGA GATGATCCTC ATGGGCGGCA CCATCGTCTG CGCCCAGATG
GGCGACCCCA ACGCGTCGAT CCCCACGCCG CAGCCGGTCT ACACCCGGCC CATGTTCGGG
GCTTACGGAC GGTCCGTGGA AAACTCCGCC GTCCTGTTCG TCAGCCAGGC GGGGCAGGCG
GCGGGCATCG GCGCCAGCCT CGGCCTCGCC AAACAGACCC TCGCGGTCAA GACCTGCCGC
GATATCGGCA AATCTTCTAT GGTGCATAAC AGCGCCACGC CAGAGGTCGA GGTGCATCCC
GAAACCTACG AGGTGCGCGC CGATGGGGAG TTGTTGACCT GCGAGCCGGC GACAGAACTG
CCGCTCGCCC AGCGTTACTT CATGTTCTGA
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| Protein sequence | MPATISRAAY ADMYGPTTGD KVRLADTDLI IEVERDLTTY GEEVKFGGGK VIRDGMGQSQ
ATRAEGAVDT VITNALIVDH TGIYKADVGL RDGVIAAIGK AGNPDTQTGV DIIIGPGTEA
IAGEGRILTA GGFDSHIHFI CPQQIEDALH SGITTMIGGG TGPAHGSLAT TCTPGAFHIG
RMLQSLDAFP MNFGLAGKGN ASRPGALVEM IEAGACAMKL HEDWGTTPGA IDCCLSVADD
MDVQVMIHTD TLNESGFVEN TIAAMKGRTI HAFHTEGAGG GHAPDIMKVV GFEHVLPSST
NPTMPYTVNT LEEHLDMLMV CHHLDKAIPE DVAFAESRIR KETIAAEDIL HDMGAFSIIA
SDSQAMGRVG EVIIRTWQTA DKMKKQRGRL AEETGDNDNF RVRRYIAKYT INPAIAHGIS
AHIGSIEVGK RADLCLWNPA FFGVKPEMIL MGGTIVCAQM GDPNASIPTP QPVYTRPMFG
AYGRSVENSA VLFVSQAGQA AGIGASLGLA KQTLAVKTCR DIGKSSMVHN SATPEVEVHP
ETYEVRADGE LLTCEPATEL PLAQRYFMF
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