| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2358 |
|---|
| Symbol | |
|---|
| ID | 5714013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2492678 |
|---|
| End bp | 2493325 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641268282 |
|---|
| Product | putative lysine exporter protein |
|---|
| Protein accession | YP_001533695 |
|---|
| Protein GI | 159044901 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTA CCATCATGCC GATCGAGACC TGGCTCGCCT TCGTGGCGGC CTCGACGCTT
CTGCTCCTGA TCCCCGGCCC GACGATCCTT CTGGTGTTGA GCTATGCGCT CAGCCAGGGG
CGACGGGTCG CTCTGAGCAC GGCGGCGGGG GTCGCGCTGG GGGACCTGAT TGCCATGAGC
GCTTCGCTCG CGGGTCTCGG TGCGCTGGTG CTGGCGTCGG CCACCCTGTT CACGGCGCTG
AAATGGGTGG GCGCGGTCTA TCTGATCTGG CTCGGGATCA AGTTGCTACG CAGTGCAACG
GGGGCCGCAT TGGCGCCAGG CCATGTGCAG GGCGCGGGCA AGGTCAGGCC GCGCGAGACC
TTCCTTCATG CCACCACGGT CACGGCGCTC AACCCCAAGA GCATCGCCTT CTTCATCGCG
TTCGTGCCGC AGTTCATCGA TGCCAGCGCG GTGCTGCTGC CGCAATTCAC CCTTCTGATC
CTGACCTTCG TAACGCTCGC GACCCTGAAC GCGCTGGCCT ATGCGCTGCT GGCCGATCGG
CTGAGAAGAG CCATAAGGCG TCCCCGTGTG CTCGCCTGGA TCACCCGCGC GGGTGGCGGA
ACGCTGATCG GCATGGGTGT GCTGACGGCC ACGGCACAGC GCGCCTGA
|
|---|
| Protein sequence | MPLTIMPIET WLAFVAASTL LLLIPGPTIL LVLSYALSQG RRVALSTAAG VALGDLIAMS
ASLAGLGALV LASATLFTAL KWVGAVYLIW LGIKLLRSAT GAALAPGHVQ GAGKVRPRET
FLHATTVTAL NPKSIAFFIA FVPQFIDASA VLLPQFTLLI LTFVTLATLN ALAYALLADR
LRRAIRRPRV LAWITRAGGG TLIGMGVLTA TAQRA
|
|---|
| |