| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2318 |
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| Symbol | phrB |
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| ID | 5713973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2449473 |
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| End bp | 2450903 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268242 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001533655 |
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| Protein GI | 159044861 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTC AGACCGACAG GGCGCCGGTG ATCTGGTGGG TGCGCCGGGA CCTCCGGCTG
AGCGACAACC GGGCGCTTGT GGCGGCGGTC GAGACCGGTG CGCCGGTGAT CCCGGTCTTC
CTCTGCGATC CCATTCTCGA CAGCCTCGGC GCGGCTCCCA AATGGCGCTT CGGGCTCGGG
GCGGCGGCGC TGGACGCAGC CCTTCGGGAC CGCGGCTCGC GGCTGATCTA CCGCAAAGGC
GACGCGCTCG AAACCCTGCG CGCTCTGGTG TCGGAAACCG GTGCCGAGAC CGTCTACTGG
AGCCGCGCCT ACGACCCCGA CCAGGTCGCC CGCGACAAGG CCGTCAAATC CGGGTTGCAG
GACGACGGCG TGGACGCGCG CAGCTTCACC GGGCACCTGT TGATTGAGCC TTGGACGGTC
GAGACCGGCT CGGGCGGGTT CTACAAGGTC TACACACCGT TCTGGAAAGC GGTCCGTGAC
CGCGCCATGC CCGAGCCGCA GCCCGCCCCC GACCGCATCC CCGCCCCCGA CAACTGGCCC
GAGAGCGACC GGCTCGACTA CTGGGCACTG GGGGCCGCCA TGAACCGCGG CGCGGCCATC
GTAGCGCCGC ATCTCGCCAT CGGTGAGGAC GCGGCCCGCG GTCGGCTCGG CGCATTCATC
GCCCACCGGG TCGGGGATTA CGACCGCGCC CGCGACATCC CCGGCATCGA AGGCACCTCG
CGCCTGTCGG AAAACCTCAC CTATGGCGAG ATCGGCCCCG CCACCTGCTG GCAAGCGGGC
CAGCGCGCGC TGGCCGAGGG CAAGGCCGGG GCGGAGACCT TCCTCAAGGA GCTTGTCTGG
CGCGAGTTCG CCTATCACCT GGTCTGGCAC ACGCCCCACC TGATCGAGAA GAACTGGCGC
GCGGAGTGGG ACCACTTCCC CTGGCGCGAT GACAATGCGG ACGCAGAGAC CTGGCGCCGG
GGCCGCACGG GCATCCGGTT TGTCGATGCG GCCATGCGCG AGATGTATGT CACCGGCACC
ATGCACAACC GCGGCCGGAT GATCGTGGCC TCTTACCTCA CCAAGCACCT GATGACCCAT
TGGCGGGTCG GGCAGGCGTG GTTCGATGAT TGCCTGGTGG ATTGGGACCC GGCCTCCAAC
GCCATGGGCT GGCAATGGGC GGCGGGCTCC GGCCCTGACG CCGCGCCCTA TTTCCGCGTG
TTCAACCCCG ACACCCAGCT CGACAAATTC GACCGCGACC AGTCCTACCA ACGCCGTTTC
ATCGCCGAAG GGCAGGGCAC GCCGCCCGAG GATGCGCGCG CGTATTTCGA TGCGATCCCG
CGCAGCTGGG GTCTGTCGCC CGACGACGCC TACCCGGATC CGATCGTACC GCTGGACGAA
GGCCGCAAGC GCGCCCTCGA CGCCTACCAG GCGCGCAAGG ATGCTGCATA A
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| Protein sequence | MSSQTDRAPV IWWVRRDLRL SDNRALVAAV ETGAPVIPVF LCDPILDSLG AAPKWRFGLG
AAALDAALRD RGSRLIYRKG DALETLRALV SETGAETVYW SRAYDPDQVA RDKAVKSGLQ
DDGVDARSFT GHLLIEPWTV ETGSGGFYKV YTPFWKAVRD RAMPEPQPAP DRIPAPDNWP
ESDRLDYWAL GAAMNRGAAI VAPHLAIGED AARGRLGAFI AHRVGDYDRA RDIPGIEGTS
RLSENLTYGE IGPATCWQAG QRALAEGKAG AETFLKELVW REFAYHLVWH TPHLIEKNWR
AEWDHFPWRD DNADAETWRR GRTGIRFVDA AMREMYVTGT MHNRGRMIVA SYLTKHLMTH
WRVGQAWFDD CLVDWDPASN AMGWQWAAGS GPDAAPYFRV FNPDTQLDKF DRDQSYQRRF
IAEGQGTPPE DARAYFDAIP RSWGLSPDDA YPDPIVPLDE GRKRALDAYQ ARKDAA
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