Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2293 |
Symbol | |
ID | 5713947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2422831 |
End bp | 2423928 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268216 |
Product | secretion protein |
Protein accession | YP_001533630 |
Protein GI | 159044836 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CCCAGACATC TCCGCCTTCC GGAGGCAGCC CAGCCAGAAC CGTTGCGCTG GTGGTTGTCG TGGCGCTGGT GCTGATCGCT GGGCTTTATG CGCTGATGGA TCGCTATGTG CCCAGCAGCC CGCGCGGGAT TGTATCGGCC AACGTGGTGC AGATCGCTCC GCGGGTCTCG GGCACGATCA CCCGCGTTCA TGTGGCCGAC GATGCGATCG TTGAGGCGGG GGATCCGCTC TTCTCGCTCG ATCCTCGCCC GTTCGAGCTG GCGGTGCGGC AGGCCGAGGC GAATCTGAAC ACCGCGCTTC AGACCGTAGA TGCCTCGGGC GCGTCGCTGG TCGCGGCACA GGCCGCCGTC ACCCAGGCCC GCACCGCGCT TGAAAACACG CAGGCCGAGG CCGACCGGAC CTTTCAGCTG GAAGAGCGCG GCATCGTGGC CACCGCCCGC GGCGATGACG CCCGCGCCGC GGTCGAGTCC GCTCAGGCCC AGCTGGATCA GGCGGAGGCC AATCTCGACA GCGCACGAGC GCAGCTTGGC CCCGAGGGGG CAGACAACCC CACCATCCAG GCCGCCACGG CACAACTGGA ACAGGCGCAG TATGACCTGG CCTCGACCAC GGTGACCGCG CCGCACCTCG GGGTTGTAAC CAACGTGACC TTGTCGGAGG GGCAGTTCAT CGGGGCAGGA AGCCCGGCCT TGACCTTCAT CGACGCCGAG GCCGGTTGGA TCACCGTCGA TCTGCGCGAG AACCAGCTTC AGAAGATCGA GGCGGGAGAT CCGGCCCGCG TCTTGTTCGA TGCGCTTCCG GGGCGGATTT TCGAAGGACG GGTCCAGAGT ATCGCCTGGG GTATCGCGCC AAGGCGCACG GTGCAGGGCG GGTTGGTTGC GAACCAGCAG ACGACCCAGT GGTTCGAGCC GGCGCGCACA ATCCCCGTGC GGATCGAGCT GGAAGGCGGG ATGGAGAACT GGCCCTATGC CGTCCGCGTC GGCGGCAAGG TCCATGCGGT GATCTTTTCC GAGAGCGAAA CCGGCCCCAT CGCCTGGGTG GCGCGCGGGT TGCAACGGCT GCGCTCCTGG CTCAGCTACC TGCACTGA
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Protein sequence | MSETQTSPPS GGSPARTVAL VVVVALVLIA GLYALMDRYV PSSPRGIVSA NVVQIAPRVS GTITRVHVAD DAIVEAGDPL FSLDPRPFEL AVRQAEANLN TALQTVDASG ASLVAAQAAV TQARTALENT QAEADRTFQL EERGIVATAR GDDARAAVES AQAQLDQAEA NLDSARAQLG PEGADNPTIQ AATAQLEQAQ YDLASTTVTA PHLGVVTNVT LSEGQFIGAG SPALTFIDAE AGWITVDLRE NQLQKIEAGD PARVLFDALP GRIFEGRVQS IAWGIAPRRT VQGGLVANQQ TTQWFEPART IPVRIELEGG MENWPYAVRV GGKVHAVIFS ESETGPIAWV ARGLQRLRSW LSYLH
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