Gene Dshi_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2220 
Symbol 
ID5713873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2343977 
End bp2344417 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID641268142 
Producthypothetical protein 
Protein accessionYP_001533557 
Protein GI159044763 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTG ATTTGCTCAA GCGCCTGACG GCGCCCGCGC CCGAAGCCTT TCCGGAACCC 
GATGCCCGGC TCGCGCTCGC GGCCCTGCTG GTGCGTATCG CCCGGTCCGA CGGGGATTAT
GCCGAGGCCG AGAAGGCCCG GATCGACAAG ATCATCGCGA AACGGCACGG CCTGTCCCCC
TTCGAGGCGA CGAAGATGCG CGGCGATGCC GAGGCGCTGG AGGCGCAGGC CCCCGACACG
GTGCGCTTCA CCCGCGCGAT CAAGGATGGC GTGCCCTACG AGGACCGGAC CGCGGTGATC
GAAGCCCTGT GGGGCGTGGT TCTGGCGGAC GGGGTGCGCG ACCCGGAGGA GGATTCGCTC
CTGCGGCTCA CGGCGAACCT GCTGGGCGTG AACGATCGCG ACAGTGCATT GGCCCGGCAG
CGGGTCGAAG CCGGCGCCTG A
 
Protein sequence
MFGDLLKRLT APAPEAFPEP DARLALAALL VRIARSDGDY AEAEKARIDK IIAKRHGLSP 
FEATKMRGDA EALEAQAPDT VRFTRAIKDG VPYEDRTAVI EALWGVVLAD GVRDPEEDSL
LRLTANLLGV NDRDSALARQ RVEAGA