Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2209 |
Symbol | |
ID | 5713862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2335419 |
End bp | 2336249 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268131 |
Product | hypothetical protein |
Protein accession | YP_001533546 |
Protein GI | 159044752 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0133362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA CGGTTGCCCT GATGCTGTTG GCCATGAGCC TGATCCCGCT GGGCGACACC GCGGGCAAGA TGCTCGTGGG CGCGGGTGTG TCACCGTTTT TCGTGGGCTG GAGCCGGTTT GCCCTGGGCG TGGTGCTGGT GCTGCCGTTC ATGGCCGGGG CGTTCGAGTC GCGGATCTTT CTCGATTGGC GGATCTGGCT GCGCGGAGCA CTGATCGGGG CGGGGGTGGC CTGCATCCTG ACGGCGCTGA GGACCGAGCC GCTGGCCAAT GTGTTCGGGG CGTTCTTCGT CGGGCCGATC CTGTCCTATT TCCTGTCGGG GGTGCTGTTG GGGGAGCGAT TGTCCACCGG GCGGACGCTG TTGCTGCTGA TGGGGTTCGC GGGGGTGCTC TTGGTGGTGC AGCCGGGGTT CGGGATGACC GTGGGGCTGG GCTTCGCGGT GGCGGCGGGG GTGTTCTACG GGCTCTTTCT GGTGGCGAGC CGGTGGGTGG CGGATGTGGC GCGGCCCCGG GCGCTCTTGC TGTCGCAGGT GGCGATTGCG GCGCTGGTGC TGGCCCCGTT CGGGCTGAGC ACGGTGCCTG CGTTCAGCTG GCCCGTGGCG GGGCTGGTTT TATGGTCGGC GGCGGGCTCG ACCCTGGGCA ACCTGATGCT TGTCATGGCG TTCCGGCGGG CGGAGGCGGG CCAGCTGGCG CCGTTCGTCT ACTTCCAGCT GATCGCGGCG ACGATCCTGG GCTGGCTCTT TTTCGGAGAG CTGCCGGGGG GGCTGGCCCT GGTGGGGCTC ACGATGCTGG TGGGGGCCGG GTTCGGCTCG CTGCTGTTGC GCCGGGGGTG A
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Protein sequence | MARTVALMLL AMSLIPLGDT AGKMLVGAGV SPFFVGWSRF ALGVVLVLPF MAGAFESRIF LDWRIWLRGA LIGAGVACIL TALRTEPLAN VFGAFFVGPI LSYFLSGVLL GERLSTGRTL LLLMGFAGVL LVVQPGFGMT VGLGFAVAAG VFYGLFLVAS RWVADVARPR ALLLSQVAIA ALVLAPFGLS TVPAFSWPVA GLVLWSAAGS TLGNLMLVMA FRRAEAGQLA PFVYFQLIAA TILGWLFFGE LPGGLALVGL TMLVGAGFGS LLLRRG
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