| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2058 |
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| Symbol | |
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| ID | 5713053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2176569 |
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| End bp | 2177234 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267980 |
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| Product | short chain dehydrogenase / reductase |
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| Protein accession | YP_001533396 |
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| Protein GI | 159044602 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.252145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCG TGGTGACAGG CGCCTCTCGA GGCATCGGAC TGGAATTGAC CCGCGTGCTT
GCGGCGCGTG GACATTCCGT TCTGGGCACC TATCGCACGG CCCCGCCGGA GACGATCGAC
GGCGTGTCAT GGCACCCGCT CAATGTCACG GACCCAGACA GCCATGCGGC GCTGAGCGCG
CATCTGGACG GACGCCCGAT CGATCTGCTG GTCTGCAATG CCGGGATCTA TCTCGATCGG
GAAGAAAACC TGGCCGATGG CTACCCGCCG CAGATGTGGG CGCGGATGTT CGAGACCAAC
GTGATGGGGG TGTTCCTGTC GGTCCAGTCG CTCCTGCCAC AGCTGCAGCA GGCCCGGCAG
GCCAAGATCG CGATCATTTC CTCGCAAATG GCGTCGCACA CGCACGCGCC GGGGCGCTCC
TATATCTACC GGGCGTCCAA GGCGGCGGCG CTGAACCTCG GGCGCAACCT GGCCACGGAC
CTCGCGGGCC TGGGAATTTC GGTCGGCATC TATCACCCGG GCTGGGTGCA GACGGACATG
GGCGGTCCCA CCGCGCATCT CACTCCGGCC CAGTCAGCAC AAGGCCTCGC CGACCGGTTC
GAGGCCCTGA CCCTGGACAC CTCCGGCTGC TTCGAGATGT GGAATGGACA AGCGCACCCT
TATTGA
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| Protein sequence | MQSVVTGASR GIGLELTRVL AARGHSVLGT YRTAPPETID GVSWHPLNVT DPDSHAALSA
HLDGRPIDLL VCNAGIYLDR EENLADGYPP QMWARMFETN VMGVFLSVQS LLPQLQQARQ
AKIAIISSQM ASHTHAPGRS YIYRASKAAA LNLGRNLATD LAGLGISVGI YHPGWVQTDM
GGPTAHLTPA QSAQGLADRF EALTLDTSGC FEMWNGQAHP Y
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