Gene Dshi_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2024 
Symbol 
ID5713019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2144760 
End bp2145515 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID641267948 
Producthypothetical protein 
Protein accessionYP_001533364 
Protein GI159044570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.396668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0591457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGCCT TGGATCCCGT CGCGCTTCTG GCCATCTTCG CGGCCCTCGC CCTGGGCGGC 
ACCGTCAAGG GGGCGACCGG CGCGGGCGCG CCGGTGATCG CGGTGCCGGT GATCGCGGCG
TTCTACGACG TGCGGCTCGG CGTGATGATC ATGGCGATGC CGAATCTCCT GTCGAACAGC
TGGCAGCTGT GGCGCTACCG CGCGCATCTG ATCCCCGGCG GGTTCACCTG GATGCTGGCG
GGCGGGGCGG CGGCGGGCTG CCTGGCCGGT ACCTTCCTGC TCGCGGTGCT GCCGGACCGG
GTCCTGCTGC TGGCGGTGGC GTTCGGAGTG GCGGTCTATA TCGGCCTGCG CCTTGCACGC
CCGGAGTTCC GGTTGGCGCT GGACACCGCA CGGCGCATCG TCTGGCCGGT ATCCCTGGGG
GCGGGGCTGT TGCAGGGGGC GGCGGGGATC TCTGCCCCGA TCACCCTGAG CTATCTCAAC
GCGATGCGCC TGGCGCGGCC GGTTTTCATC GCGACCGTCT CGACCTGTTT CATCGGCATG
GCGGTGGTGC AGGTGCCCGC GCTCTTTGCC ACCGGGCTTC TGACCCTGCC GGTCTTCGGC
CTGAGCGTTG CCGCGCTGGC GCCGATCCTG TTGTTCATGC CGCTGGGGGC GTGGCTGGCG
CGCAAGATGT CCGCCGAGGG GTTTGACAAG CTGGTTCTGG GGTTGCTGAG TGCGCTGGCG
GCGCGGCTCT TCTACGTGGC CCTCACCGGC GGCTGA
 
Protein sequence
MPALDPVALL AIFAALALGG TVKGATGAGA PVIAVPVIAA FYDVRLGVMI MAMPNLLSNS 
WQLWRYRAHL IPGGFTWMLA GGAAAGCLAG TFLLAVLPDR VLLLAVAFGV AVYIGLRLAR
PEFRLALDTA RRIVWPVSLG AGLLQGAAGI SAPITLSYLN AMRLARPVFI ATVSTCFIGM
AVVQVPALFA TGLLTLPVFG LSVAALAPIL LFMPLGAWLA RKMSAEGFDK LVLGLLSALA
ARLFYVALTG G