Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1878 |
Symbol | |
ID | 5712870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1956140 |
End bp | 1957117 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267802 |
Product | hypothetical protein |
Protein accession | YP_001533221 |
Protein GI | 159044427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.324693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.526559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGCT GCGCCCTCTG GTCTCTACCC TTCCTTGTCC TGCCCCTCAC GTCCCTGGCC GATCCGCTGC CCTCCTGGAA CGACAGCGCG TCCAAGACCG CCATCCTCGA CTTCGTCGCC GCGGTCACCG ATCCCACCTC GGACAGCTAC GTCCCCGAAC CCGACCGGAT CGCCGTCTTC GACAATGACG GCACCCTGTG GAGCGAGCAG CCGCTCTATT TCCAGCTCGC CTATGCCCTC GACATGGTCC GGCAAAAGGC CGAGGCCGAC CCCGCGATCC TGACCTCCGA CGCGCTCCGG GCGGCAGCGG CGGGCGACAT CGCCGCGCTG CGCGAAACCG GGCGCGAGGG CATGCTGGAG GTGGTCAGCC TCTCCCACGC CAACATCACG CCCGAGGCCT TTCGCGCCTC CGTCCACGGC TGGCTGACCA CGACCGAGCA TCCCACGACC GGGCTGACCT ATGCCGAGAT GACCTACCAG CCCATGGTCG AGTTGCTGCG CTACCTGCGG GACGAGGATT TCAGCACCTA TATCGTCTCC GGCGGCACCC TCGATTTCAT GCGCGCCATC GCGGAGGAAG CCTACGGCAT CCCGCCCGCC CAGGTGATCG GGAGCATCGT GAACCTGAGC TATTCCGTCG AGGACGGCGT GCCCACCCTG ACCAAGCAGC CGGGCCTCTT CTTCGTCGAC CGCACCGGCG ACAAGCCCGT GGGCATCATG AACCATATCG GCCAGCGCCC GATCTTCGCC GCCGGAAATT CGGACGCCGA TTTCGAGATG GTCGACTGGG TCACCGCGGG GGAGGGGGCG CGGTTCGGCA TGTTCATCCA CCACACCGAC GCAGAGCGCG AGACCGCCTA TGACCGCGGC AGCCCCATCG GCGCGCTCGA CGTGGTTCTG GACGAGGCCG AGGGCCGGGG CTGGGTGCTC GTGGACATGG CCAAAGACTG GTCGCGGGTC TGGTCCGCCA CCCCCTGA
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Protein sequence | MHRCALWSLP FLVLPLTSLA DPLPSWNDSA SKTAILDFVA AVTDPTSDSY VPEPDRIAVF DNDGTLWSEQ PLYFQLAYAL DMVRQKAEAD PAILTSDALR AAAAGDIAAL RETGREGMLE VVSLSHANIT PEAFRASVHG WLTTTEHPTT GLTYAEMTYQ PMVELLRYLR DEDFSTYIVS GGTLDFMRAI AEEAYGIPPA QVIGSIVNLS YSVEDGVPTL TKQPGLFFVD RTGDKPVGIM NHIGQRPIFA AGNSDADFEM VDWVTAGEGA RFGMFIHHTD AERETAYDRG SPIGALDVVL DEAEGRGWVL VDMAKDWSRV WSATP
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