Gene Dshi_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1873 
Symbol 
ID5712865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1952797 
End bp1953105 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content67% 
IMG OID641267797 
Productputative cytochrome c 
Protein accessionYP_001533216 
Protein GI159044422 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.490249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.677809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA AGACCTTGCT CACCCTTGCC CTGCTCGCCC TCGGCACAAC CCAGGCCCAG 
GCGGGCGACC CCGCCTCGGG CGAGGCGCTC TACGGGGATG TCTGCGCGGC CTGCCACGGC
CCGACCGGCA AGGGCATGGC CAGCTATCCG CGCATCGCGG GCAAGGAGGC CGACTATCTC
ACCGATCGGC TGATCACCTA CCGGGCGGGC GAGCGGGTGG GGCCCAATTC CATGCTCATG
ATCCCCATGG CAGCCGATCT CAGCGACACG GATATCGCCA ATCTCGCCGC CTATCTGTCG
GGCGGATGA
 
Protein sequence
MKSKTLLTLA LLALGTTQAQ AGDPASGEAL YGDVCAACHG PTGKGMASYP RIAGKEADYL 
TDRLITYRAG ERVGPNSMLM IPMAADLSDT DIANLAAYLS GG