Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1863 |
Symbol | serS |
ID | 5712855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1941457 |
End bp | 1942752 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641267787 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001533206 |
Protein GI | 159044412 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.517326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGACA TTCGCCTGAT CCGCGAGACG CCGGAGGCGT TCGACGCCGC GCTGACCCGC CGCCCCGGGG TGGCGCCGGT CTCGGGCGAG ATCCTCGCGC TGGATGCCGC CCGGCGGGAG AAGATCCTGG CTGCGGAGAC CGCGCAGGCG GAGCAGAACG CGGCCTCCAA GCAGGTGGGG GCGGCCAAGG CCGCGGGGGA TGAGGCGGAG TTCGAGCGGC TGCGCGCGTT GGTGGGCGCG AAGAAGGCGG AGGTGGCCGC GCTCAAGGCC GCGGCGGCGG AGGATGATGC GGCGCTGAGC GCGCGGCTGA TGGAGATCCC CAACTTGCCC TTCGACGATA CGCCCGAGGG CGCGGACGAG GCGGACAATG TGGAGATCAA GCGCTGGGGC ACGCCGCGCG ACCTGGGATT TGCGCCGAAG GAGCATTACG CGCTGCCCAG CGTCGTGCCG GGCATGGATT TCGAGGCGGC GGCGAAGCTG TCGGGGTCGC GGTTCGTGGT GCTGTCGGGG GCCGTGGCGC GGGTCCACCG GGCGCTGGCG CAGTTCATGG TCGACACCCA TGTGGAGCAG AACGGTCTGA CCGAGACCTG GACGCCGGTG CTGGTGCGCG AGGAGATGAT GCTCGGCACC GGGCAGTTGC CGAAGTTCGG GGAGGACAGC TACCAGACGC GGGAGGGCTG GTGGCTGGTG CCCACAGCGG AGGTGAGCCT GACCAACCTG GTGGCGGGCG AGATCGTGGA GGCGGCCTCC CTGCCCCGGC GCTATGTGGC CCATACCCAG TGCTTCCGGT CCGAGGCGGG CTCGGCGGGG CGGGACACGG CCGGCATGCT GCGCCAGCAC CAGTTCGAGA AGGTGGAGAT GGTGTCGGTG ACGCGGCCCG AGGACAGCCG GGCGGAGCTG GACCGGATGA CCGGCTGCGC CGAGGGGATT CTGGAGGCGC TGGGGTTGCC CTACCGCACC ATCGTGCTGT GCACCGGGGA CATGGGCTTC GGGGCGCGGC GGACCCATGA TATCGAGGTC TGGCTGCCCG GGCAGGACGC CTATCGCGAG ATCAGCTCGG TCTCGGTCTG CGGCGATTTC CAGGCGCGGC GGATGAATGC GCGGTTCCGG CCGGAGGGCG GGGGCAAGCC GGAGTTCGTG CATACGCTGA ACGGGTCGGG GCTGGCCGTG GGGCGGTGCC TGATCGCGGT GCTGGAGAAC GGGCAGCAGG CGGACGGGTC GGTGGTGCTG CCGGAGGTGC TGCATGGGTA TCTGCGGGGG CGGACGCGGA TCGACGCTCA GGGGGGGCTC GTCTGA
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Protein sequence | MHDIRLIRET PEAFDAALTR RPGVAPVSGE ILALDAARRE KILAAETAQA EQNAASKQVG AAKAAGDEAE FERLRALVGA KKAEVAALKA AAAEDDAALS ARLMEIPNLP FDDTPEGADE ADNVEIKRWG TPRDLGFAPK EHYALPSVVP GMDFEAAAKL SGSRFVVLSG AVARVHRALA QFMVDTHVEQ NGLTETWTPV LVREEMMLGT GQLPKFGEDS YQTREGWWLV PTAEVSLTNL VAGEIVEAAS LPRRYVAHTQ CFRSEAGSAG RDTAGMLRQH QFEKVEMVSV TRPEDSRAEL DRMTGCAEGI LEALGLPYRT IVLCTGDMGF GARRTHDIEV WLPGQDAYRE ISSVSVCGDF QARRMNARFR PEGGGKPEFV HTLNGSGLAV GRCLIAVLEN GQQADGSVVL PEVLHGYLRG RTRIDAQGGL V
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