| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1794 |
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| Symbol | |
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| ID | 5713363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1863844 |
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| End bp | 1865025 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267714 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533137 |
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| Protein GI | 159044343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000759831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.944472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC GCCTCGCCCC GGCCATGGCG GCCACCCCGG CCCCGCCGGT GATGGAGGCG
CGGCGCTGGC TCGCCGCGGC GCGCCTGCCC GCGGGGCTGG AGCTGCTGAA TGTGAGCCAG
GCCGCCCCGG TGGCCCCGCC GCCCCCGGCC CTGCGCGCGG CGATGGCGGC GGCACTGGAG
GAGGATCCGG GCACGCATCT TTATGGTCCC GTGCTCGGTC TGCCGGAGCT GCGCGCCGAA
CTGGCCGCAC AGATGACCGC GCGCTATGGC GGCACCGTGG CCGAGGGGCA GATCGCGATC
ACCTCGGGCT GCAACCAGGC CTTCGCAGCG GTGATCGCCA CCCTCGCCGG CCCCGGCGAT
AACGTGATTC TGCCGGTGCC GTGGTATTTC AACCACCAGA TGTGGCTGCA AATGTCCGGG
GTCGCGGCCC GCGCGCTCGA CACCGGCGAC AGCCTGCTGC CGGACCCGGA GGCCGCCGCC
GCCCTGATCG ACGCGCGCAC CCGCGCGATC GTGCTGGTCA GCCCCAACAA CCCCGGCGGC
GTGGAGTATC CTGCCGACCT GCTCGCGGCC TTTCGCGATC TCGCGCGCAG GCGGGGCCTC
GCGCTGATCC TCGACGAGAC CTACCGCGAT TTCGACAGCC GCGCGGGTGC GCCCCACGGC
CTGCTCGCCG ATCCCGATTG GGACGAGACC GTGATCTCGC TCTATTCCTT TTCCAAGGCC
TACCGGCTGA CCGGGCACCG GGTGGGGGCG GTGGCCTGTG CGCCCGACCG CCTGGCGCAG
GTGGAGAAAT TCCTCGACAC GGTGCAGATC TGCGCGCCGC AACTGGGCCA GCGCGCGGCC
CTCTGGGGGC TGCGGCACCT GTCGGACTGG CTGGCCGGGG AACGGGCCGA GATCCTGGCC
CGCCGCGCGG CGATGGAGGC GGCGTTCCAG GGTCTGCGCG ACTGGGAGCT TCTGGGCTGC
GGCGCCTATT TCGGCTATGC GCGCCACCGG CTCGGGATCC CTTCGGACGC GCTGGCGGAG
CGGATGGTGT CCGAGATCGG GGTGCTCGCC CTGCCCGGCA CCATGTTCGC GCCCCAAGGC
GCCGCGCGGG GAGGTCGCGA GATGCGCTTT GCCTTCGCCA ATATCGACGC GGACGGCATC
GCCGCCCTCG CCGACCGGCT GACCACCTAC GCCCCGTCCT GA
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| Protein sequence | MTLRLAPAMA ATPAPPVMEA RRWLAAARLP AGLELLNVSQ AAPVAPPPPA LRAAMAAALE
EDPGTHLYGP VLGLPELRAE LAAQMTARYG GTVAEGQIAI TSGCNQAFAA VIATLAGPGD
NVILPVPWYF NHQMWLQMSG VAARALDTGD SLLPDPEAAA ALIDARTRAI VLVSPNNPGG
VEYPADLLAA FRDLARRRGL ALILDETYRD FDSRAGAPHG LLADPDWDET VISLYSFSKA
YRLTGHRVGA VACAPDRLAQ VEKFLDTVQI CAPQLGQRAA LWGLRHLSDW LAGERAEILA
RRAAMEAAFQ GLRDWELLGC GAYFGYARHR LGIPSDALAE RMVSEIGVLA LPGTMFAPQG
AARGGREMRF AFANIDADGI AALADRLTTY APS
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