Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1733 |
Symbol | prfA |
ID | 5713300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1799734 |
End bp | 1800789 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267651 |
Product | peptide chain release factor 1 |
Protein accession | YP_001533076 |
Protein GI | 159044282 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.520333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCCCA CGGAAAAACT CGCCCAGATC ACGGAACGCT TCGAGTATAT CGAAGCGCGC ATGGCGGCGG GTGCCGCGGG CGAGGATATC GCGGCCCTCG GGCGCGAATA TGCCGAGCTT AAGCCCGTGG TGGCCGAGAT CGCCGCCTAT AGCCGGGCGC GCGCCGACCT GGCCGAGGCC GAGGCGATGC TGGACGATCC GGAAATGCGC GCCCTCGCCG AAGAAGAGAT CCCCGCGCTC AAGGCCCGTA TCCCGGAGAT GGAGCAGGCC CTGCGCCTGG CCCTTCTGCC CAAGGACGCC GCCGACGCCC GCCCCGCGAT GATCGAGATC CGTCCCGGCA CCGGCGGGGA GGAGGCGGCG CTGTTTGCCG GCGACCTGCT GCGCATGTAT CAGCGCTATG CCGAGGCGCA GGGCTGGCGG TTTCAGATCG TGTCCGAAAG CCTGACCGAG CTTGGCGGCA TAAAAGAAGT GATCGCCCAT GTCTCCGGCA GCGGCGTCTT CGCCAAGCTG AAATACGAAA GCGGGGTGCA CCGGGTGCAG CGCGTGCCCG TCACCGAATC CGGCGGGCGC ATCCACACCT CCGCCGCCAC GGTGGCGGTA CTCCCCGAGG CCGAGGCGGT GGATATCGAC ATCCCCGCCT CCGATATTCG CATCGACACC ATGCGCGCCA GCGGGGCAGG CGGCCAGCAT GTGAACACCA CCGATTCGGC TGTGCGGATC ACCCATATCC CCACGGGTCT GGTGGTCACC AGCTCCGAGA AATCCCAGCA TCGCAACCGC GACATCGCCA TGCAGGTGCT GCGCGCGCGG CTCTATGACC TGGAACGTCA GCGCGCCGAT GCCGAACGCT CGGCCGCGCG CAAGGGGCAG GTGGGCTCCG GCGATCGGTC CGAGCGCATC CGCACCTACA ACTTCCCGCA AGGCCGCATG ACAGACCACC GGATCAATTT GACGCTCTAC AAGCTCGACC AGGTGATGCA GGGGGATCTC GACGAGGTGA TCGCAGCCCT GGCCGCCGAC GACCAGGCCC GGCTGCTGGC GGAGGTCGAG GGGTGA
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Protein sequence | MVPTEKLAQI TERFEYIEAR MAAGAAGEDI AALGREYAEL KPVVAEIAAY SRARADLAEA EAMLDDPEMR ALAEEEIPAL KARIPEMEQA LRLALLPKDA ADARPAMIEI RPGTGGEEAA LFAGDLLRMY QRYAEAQGWR FQIVSESLTE LGGIKEVIAH VSGSGVFAKL KYESGVHRVQ RVPVTESGGR IHTSAATVAV LPEAEAVDID IPASDIRIDT MRASGAGGQH VNTTDSAVRI THIPTGLVVT SSEKSQHRNR DIAMQVLRAR LYDLERQRAD AERSAARKGQ VGSGDRSERI RTYNFPQGRM TDHRINLTLY KLDQVMQGDL DEVIAALAAD DQARLLAEVE G
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