Gene Dshi_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1730 
Symbol 
ID5713297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1797652 
End bp1797984 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID641267648 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001533073 
Protein GI159044279 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.146386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.864334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA CCCTGCCCCC CACCGTGACC GAGCGCGCCT TCGCGCGTCT CGCTGAAATC 
AACGCCGAGA GCGACGCCGC CAAGGCCCTG CGCGTGGCCG TGGAGGGTGG CGGCTGCTCG
GGGTTCCAGT ACGAGATCAA GCTGGACGAT CCGGCGGAGG ACGACCTGGT GCTGGAAGGC
AAGGGTCAGA AGGTGGTGGT GGACGCGGTG TCCCTGCCGT TCCTGGAGAA CGCGGTGATC
GACTTCACCG AGGAGTTGAT CGGCGCGCGG TTCACCATCG AGAACCCCAA TGCCAGCTCC
AGCTGCGGAT GCGGGACGAG CTTTTCCATG TAA
 
Protein sequence
MDLTLPPTVT ERAFARLAEI NAESDAAKAL RVAVEGGGCS GFQYEIKLDD PAEDDLVLEG 
KGQKVVVDAV SLPFLENAVI DFTEELIGAR FTIENPNASS SCGCGTSFSM