| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1676 |
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| Symbol | |
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| ID | 5713241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1744794 |
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| End bp | 1745453 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267592 |
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| Product | HAD-like hydrolase |
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| Protein accession | YP_001533019 |
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| Protein GI | 159044225 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.653252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.340852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACG CCCTGCTCTT TGATCTCGAC GGCACCCTGC TGGCGTCCGA CCCGCTGCAC
GCAGAGGCCT TTATCGCGCT CTTTGCCGAG CATGGCCGCA CCATCGATAC CGCGTTCTAC
AATGCGCGCA TCCACGGTCG CCTGAACGCC GAGATCTTCG CGGAATTCTT CCCCGATGCC
GACGGTGCCG CCATGGCCGA GGCCAAGGAG GCCGCATTTC GCGATCTCTT GGGCCCCTCG
GCATCGCCGA TGCCCGGGCT CACAGCCCTT CTGGACCGCG CCGACGCACA AGGCTGGCGC
ACCGCAGTCG TAACCAACGC GCCCCGAATC AACGCAGAAT TCATGCTGAA GGCCATCGGC
CTCGCGGATC GGTTCGACAC CGTGGTGGTC AGCGATGAAT GCGCGGCGGG CAAACCCGAC
CCAGCACCCT ACCGCGAAGC CCTCAGGCGG CTCGACTGCG CGCCGCGCGC CGCGCGCGCA
TTCGAAGACA GCCCCTCGGG CATCCGCTCC GCGGTTGCCG CCGGGATCAC CACGCTCGGC
CTTCGGTCCA GCCTTCCGGA CATTGCATTG CGCGCCGCGG GCGCCGCAGC CTCCCTTGCC
GATTTCACAG ACCCCACGCT GGAGCCCTAT CTCCAACGTC AATCAGGAGC CGATCCATGA
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| Protein sequence | MIHALLFDLD GTLLASDPLH AEAFIALFAE HGRTIDTAFY NARIHGRLNA EIFAEFFPDA
DGAAMAEAKE AAFRDLLGPS ASPMPGLTAL LDRADAQGWR TAVVTNAPRI NAEFMLKAIG
LADRFDTVVV SDECAAGKPD PAPYREALRR LDCAPRAARA FEDSPSGIRS AVAAGITTLG
LRSSLPDIAL RAAGAAASLA DFTDPTLEPY LQRQSGADP
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