| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1538 |
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| Symbol | phoB |
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| ID | 5713195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1599146 |
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| End bp | 1599832 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267453 |
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| Product | phosphate regulon transcriptional regulatory protein |
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| Protein accession | YP_001532881 |
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| Protein GI | 159044087 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.280381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCCGACC AACCCACCGT TCTTGTGGTC GAGGATGAAC CGGCACAGCG CGACGTGCTG
TGCTACAACC TCGAGGCCGA AGGCTTTCGC GTGGTCCAGG CCGAGAATGG CGACGAGGCC
ATGGTCATGG TCGAGGAAGA AACCCCCGAC ATCATCGTGC TGGACTGGAT GCTGCCGGCG
GTCTCGGGGA TCGAGGTCTG CCGCCGCCTG AAATCCCGCC CCGACACCCG TGCGATCCCG
ATCATCATGC TCTCGGCGCG CTCCGAAGAG GTCGACCGGG TGCGCGGGCT GGAAACCGGG
GCCGACGACT ACGTGGTCAA ACCCTACTCG GTGGTGGAGC TGATGGCCCG GGTGCGCGCG
CAACTGCGCC GGGTGCGCCC GGCGACGGTG GGACAGCAAT TGCGCTACGA CGACATTCTG
CTCGACGCCG AGAGCCACCG GGTCTTCCGC GACGACCAGG CCCTGAAACT CGGGCCCACC
GAGTTCCGCC TGCTGGCGAC CTTCATGGAA AAACCGGGCC GCGTTTGGTC GCGCGAGCAA
CTGCTCGACC GGGTCTGGGG GCGCGACATC TATGTCGATA CCCGCACCGT GGACGTCCAT
ATCGGTCGGC TGCGCAAGGC GCTGTGCCAA CACGGCGGTA CCGACCCGGT GCGCACCGTG
CGCGGGGCAG GCTACGCGCT CGGCTGA
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| Protein sequence | MSDQPTVLVV EDEPAQRDVL CYNLEAEGFR VVQAENGDEA MVMVEEETPD IIVLDWMLPA
VSGIEVCRRL KSRPDTRAIP IIMLSARSEE VDRVRGLETG ADDYVVKPYS VVELMARVRA
QLRRVRPATV GQQLRYDDIL LDAESHRVFR DDQALKLGPT EFRLLATFME KPGRVWSREQ
LLDRVWGRDI YVDTRTVDVH IGRLRKALCQ HGGTDPVRTV RGAGYALG
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