| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1496 |
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| Symbol | cdsA1 |
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| ID | 5712675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1554983 |
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| End bp | 1555774 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267411 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_001532839 |
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| Protein GI | 159044045 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0575] CDP-diglyceride synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.28827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.939207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCTGA ATGCCAGTTT CGAAGACCTG CTGCCGCGCC TGGCGTCGGC GGTGGTGATG
GTGCTCGTGG GCGTTGTCGC GATCTGGTAC GGCGGATACC TGTTCCTGTT CCTGCTGGCG
GCGGTTGTCG GTGCGATGGT GTGGGAACTG GCCCGGATGG TGGCACCCGA GGACAAGACC
GGCGCCGTGG TCGTGGCGGG GGCTGCGGCG GCGGCGCTGG CCTCCTGCGC GGTGCTGCCC
TTGGGATTTG CCCTGCCCTT GCTGATCCTG CCCGCGATGA TCGGGGTGGG CCGGTTCGAA
TCGTCCCGGC GGGTTTTTGC GCTCTATACC GCGTTCATCG GGGTTGCGGG CCTGGGCCTG
TGGGTGCTGC GACAGGATTT CGGCATGGTC TGGATGCTGT GGCTGGTTCT GTTGGTGGTG
GTGACGGACG TGGCGGGGTA TTTCGCCGGG CGGATCATCG GGGGGCCGAA ATTCTGGCCC
CGGGTCAGCC CCAAGAAGAC CTGGTCGGGC ACGGTCGCGG GTTGGATCGG CGCGGGACTG
GTGGGCTGGG GTTTCATGAC CCAGACCATC GCCGGTGCAG AGCTGATCGG CATCTCCATC
GCCCTGGCCA TGGCGAGCCA GCTGGGCGAC GTGACCGAAA GCGCGCTGAA ACGCAGGGCC
GGGGTGAAGG ACAGCTCTGC GCTGATCCCC GGTCATGGCG GGCTGCTGGA CCGGTTCGAC
GGGATGCTCG GGGCTTCGGT GCTGCTGCTG CTCGTGGAGC AGATCATCGA CTTTCCGCCC
CTTCCTCTCT GA
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| Protein sequence | MPLNASFEDL LPRLASAVVM VLVGVVAIWY GGYLFLFLLA AVVGAMVWEL ARMVAPEDKT
GAVVVAGAAA AALASCAVLP LGFALPLLIL PAMIGVGRFE SSRRVFALYT AFIGVAGLGL
WVLRQDFGMV WMLWLVLLVV VTDVAGYFAG RIIGGPKFWP RVSPKKTWSG TVAGWIGAGL
VGWGFMTQTI AGAELIGISI ALAMASQLGD VTESALKRRA GVKDSSALIP GHGGLLDRFD
GMLGASVLLL LVEQIIDFPP LPL
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